Gene
RNA
| Item | Value |
|---|---|
| gene id | G226609 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 1747880 ~ 1748087 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257129 | True | 208 | lncRNA | 0.37 | 1 | 1747880 | 1748087 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_01720326_01736077 | NA | coding | downstream | 11803 | 1720298 ~ 1736077 (-) |
| CI01000053_01655618_01660681 | NA | coding | downstream | 87143 | 1655548 ~ 1660737 (-) |
| CI01000053_01629699_01639689 | NA | coding | downstream | 108117 | 1629286 ~ 1639763 (-) |
| CI01000053_01603290_01609575 | DIXDC1A, DIXDC1 | coding | downstream | 138305 | 1602928 ~ 1609575 (-) |
| CI01000053_01166907_01193322 | CADM1B | coding | downstream | 554558 | 1166476 ~ 1193322 (-) |
| CI01000053_01759982_01765920 | NA | coding | upstream | 10598 | 1758685 ~ 1766084 (-) |
| CI01000053_01819436_01827270 | CSGR06H11ORF53, CUNH11ORF53, C4H11ORF53 | coding | upstream | 70900 | 1818987 ~ 1828591 (-) |
| CI01000053_01847036_01856935 | NA | coding | upstream | 97639 | 1845726 ~ 1857230 (-) |
| CI01000053_01932882_01958701 | SNX19B | coding | upstream | 184768 | 1932855 ~ 1960172 (-) |
| CI01000053_01964024_01971099 | RPS6KB1B, RPS6KB1 | coding | upstream | 215327 | 1963414 ~ 1971099 (-) |
| G226606 | NA | non-coding | downstream | 5115 | 1742460 ~ 1742765 (-) |
| G226513 | NA | non-coding | downstream | 125062 | 1619936 ~ 1622818 (-) |
| G225888 | NA | non-coding | downstream | 198021 | 1549507 ~ 1549859 (-) |
| G225886 | NA | non-coding | downstream | 202693 | 1544851 ~ 1545187 (-) |
| G225884 | NA | non-coding | downstream | 204138 | 1543528 ~ 1543742 (-) |
| G226614 | NA | non-coding | upstream | 28363 | 1776450 ~ 1776658 (-) |
| G226553 | NA | non-coding | upstream | 181752 | 1929839 ~ 1931337 (-) |
| G226542 | NA | non-coding | upstream | 183461 | 1931548 ~ 1931880 (-) |
| CI01000053_01982526_02001150 | VMP1 | non-coding | upstream | 234215 | 1982302 ~ 2001150 (-) |
| G226645 | NA | non-coding | upstream | 315323 | 2063410 ~ 2063725 (-) |
| G225812 | NA | other | downstream | 281148 | 1459595 ~ 1466732 (-) |
| G225574 | NA | other | downstream | 1201012 | 543647 ~ 546868 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | upstream | 469361 | 2225210 ~ 2226481 (-) |
| G226826 | NA | other | upstream | 817805 | 2565892 ~ 2567072 (-) |
| G226963 | NA | other | upstream | 1248630 | 2996717 ~ 2997268 (-) |
| CI01000053_03551506_03551965 | NA | other | upstream | 1802246 | 3550333 ~ 3552847 (-) |
| G227604 | NA | other | upstream | 2339150 | 4087237 ~ 4087740 (-) |
