G225973


Basic Information

Item Value
gene id G225973
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 1982277 ~ 1982705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU256390
TTTTTAATCAGTGGGGGAAACACTTAAACTTGAGGACAAAATGCTTTTTATTGTGATATTGTGAAATGTATAGCAGTGTAAATTTTATAGCAGCGTAAATTTTATAGCAGCAAACTATGACAAACTGAAAACATTTTCTGCAAAATATATAACTGGTCTTGACATTATTTCTTTCTCTTAAATAAATAGCTGAATGCTGAAGCAGTGATTAAAGGTAAGATCAATTTATAGTTGGTTTACAATAAAAAGCTACATCTTTGTTGTACTTAAATATTCACATACAATCAATCTGCCTCCACAAACCAGGAAATAATCCATTAAATGCCCAGACCCATCGCACACTGGAGAGAACACATTCATCAGGTAGTAAATATTCTTCAGTTCAACATTCCCGGCACAAAATTCAGCCCTGAAAACGTGGATGGTGAC
>TU256389
AGCAGTGTAAATTTTATAGCAGCGTAAATTTTATAGCAGCAAACTATGACAAACTGAAAACATTTTCTGCAAAATATATAACTGGTCTTGACATTATTTCTTTCTCTTAAATAAATAGCTGAATGCTGAAGCAGTGATTAAAGGTAAGATCAATTTATAGTTGGTTTACAATAAAAAGCTACATCTTTGTTGTACTTAAATATTCACATACAATCAATCTGCCTCCACAAACCAGGAAATAATCCATTAAATGCCCAGACCCATCGCACACTGGAGAGAACACATTCATCAGGTAGTAAATATTCTTCAGTTCAACATTCCCGGCACAAAATTCAGCCCTGAAAACGTGGATGGTGAC

Function

NR:

description
PREDICTED: thyrotropin-releasing hormone-degrading ectoenzyme-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256390 False 429 lncRNA 0.34 1 1982277 1982705
TU256389 True 358 lncRNA 0.34 1 1982348 1982705

Neighbor

gene id symbol gene type direction distance location
CI01000053_01972623_01978167 TUBD1 coding upstream 3638 1972623 ~ 1978639 (+)
CI01000053_01860130_01870321 NA coding upstream 111841 1859970 ~ 1870436 (+)
CI01000053_01790197_01796045 POU2AF1 coding upstream 184820 1789189 ~ 1797457 (+)
CI01000053_01751833_01753354 ATF5B coding upstream 228826 1751833 ~ 1753451 (+)
CI01000053_01663005_01713138 PHLDB1 coding upstream 269080 1661039 ~ 1713197 (+)
CI01000053_02071290_02083892 NA coding downstream 88585 2071290 ~ 2084045 (+)
CI01000053_02086227_02097758 CUL5, CUL5A, CUL5.L coding downstream 102576 2085281 ~ 2097947 (+)
CI01000053_02103844_02105757 MRPL28 coding downstream 120849 2103554 ~ 2105895 (+)
CI01000053_02118918_02119910 MOS coding downstream 136124 2118829 ~ 2120222 (+)
CI01000053_02139803_02142840 NA coding downstream 157025 2139730 ~ 2142866 (+)
G226011 NA non-coding upstream 19909 1962040 ~ 1962368 (+)
G226010 NA non-coding upstream 20720 1961281 ~ 1961557 (+)
G225981 NA non-coding upstream 50378 1931566 ~ 1931899 (+)
G225978 NA non-coding upstream 50940 1929770 ~ 1931337 (+)
G225997 NA non-coding upstream 57605 1924424 ~ 1924672 (+)
G226015 NA non-coding downstream 19461 2002166 ~ 2002539 (+)
G225970 NA non-coding downstream 28901 2011606 ~ 2016203 (+)
G225971 NA non-coding downstream 39423 2022128 ~ 2023012 (+)
G225979 NA non-coding downstream 49479 2032184 ~ 2032637 (+)
G226017 NA non-coding downstream 55587 2038292 ~ 2038514 (+)
G225952 NA other upstream 108982 1872874 ~ 1873295 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other downstream 610522 2592558 ~ 2595467 (+)
G226292 NA other downstream 1053897 3036602 ~ 3046783 (+)
G226347 NA other downstream 1289669 3272374 ~ 3274911 (+)
G226399 NA other downstream 1638093 3620798 ~ 3697529 (+)
G227317 NA other downstream 2432246 4414951 ~ 4415593 (+)

Expression


Co-expression Network