G226015


Basic Information

Item Value
gene id G226015
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 2002166 ~ 2002539 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU256432
TTGTTTTATTCAATGAGACAAAAATAGAAAGGATATTTTAGGATGACCCAGAAGGCTAATTTAGATTTTCAAGGTCGGTCTTTTACGCTACCAAATGCATTTCCGGGATCGTGATAGTGCAGTAGAGTAGCAGACTTCTCACTGTTATCTGCCATACTGTCGAATTACCGAGAAGTTAATGTCCTTTTTCAGTGCGACTATTTATAGGAGTCTAAAATGCATTTTGATTTTTAAACGTTTCTTACGTACTTCTCTCTTAAAGACTGATACAAACAAGCAGGCTTGTATTAATTTTTAAAAATATCTAGTTATACATTTGTTGTTTCGCTCAGTAATTTTCCTTCATTATAAAGTTTAAGAAATTTATATTTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256432 True 374 lncRNA 0.32 1 2002166 2002539

Neighbor

gene id symbol gene type direction distance location
CI01000053_01972623_01978167 TUBD1 coding upstream 23527 1972623 ~ 1978639 (+)
CI01000053_01860130_01870321 NA coding upstream 131730 1859970 ~ 1870436 (+)
CI01000053_01790197_01796045 POU2AF1 coding upstream 204709 1789189 ~ 1797457 (+)
CI01000053_01751833_01753354 ATF5B coding upstream 248715 1751833 ~ 1753451 (+)
CI01000053_01663005_01713138 PHLDB1 coding upstream 288969 1661039 ~ 1713197 (+)
CI01000053_02071290_02083892 NA coding downstream 68751 2071290 ~ 2084045 (+)
CI01000053_02086227_02097758 CUL5, CUL5A, CUL5.L coding downstream 82742 2085281 ~ 2097947 (+)
CI01000053_02103844_02105757 MRPL28 coding downstream 101015 2103554 ~ 2105895 (+)
CI01000053_02118918_02119910 MOS coding downstream 116290 2118829 ~ 2120222 (+)
CI01000053_02139803_02142840 NA coding downstream 137191 2139730 ~ 2142866 (+)
G225973 NA non-coding upstream 19461 1982277 ~ 1982705 (+)
G226011 NA non-coding upstream 39798 1962040 ~ 1962368 (+)
G226010 NA non-coding upstream 40609 1961281 ~ 1961557 (+)
G225981 NA non-coding upstream 70267 1931566 ~ 1931899 (+)
G225978 NA non-coding upstream 70829 1929770 ~ 1931337 (+)
G225970 NA non-coding downstream 9067 2011606 ~ 2016203 (+)
G225971 NA non-coding downstream 19589 2022128 ~ 2023012 (+)
G225979 NA non-coding downstream 29645 2032184 ~ 2032637 (+)
G226017 NA non-coding downstream 35753 2038292 ~ 2038514 (+)
G225984 NA non-coding downstream 38167 2040706 ~ 2041045 (+)
G225952 NA other upstream 128871 1872874 ~ 1873295 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other downstream 590688 2592558 ~ 2595467 (+)
G226292 NA other downstream 1034063 3036602 ~ 3046783 (+)
G226347 NA other downstream 1269835 3272374 ~ 3274911 (+)
G226399 NA other downstream 1618259 3620798 ~ 3697529 (+)
G227317 NA other downstream 2412412 4414951 ~ 4415593 (+)

Expression


Co-expression Network