XLOC_009823 (them4)


Basic Information

Item Value
gene id XLOC_009823
gene name them4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 17763848 ~ 17798412 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019614
ATTCCGCGTGTTCATATTAGCCAATCACCTTTGCCGTCTGTGATTCTGAATGTCACCGGCTGATCTTCTATTTTCAGCTGTTTAGTGACATTGGTTTTGTACAGTATTTGACAAGCCGTTCTTTCTAATTTAGGATTGTTTTCATTTATGAAgctttaaatgaataaacagctAAAGCTTAATAAGTAGTTGTTAGCTGTGTGCTATTGCTTTTGGCTGGCAGACATCGCGCGAGGGAATGCTTTAAACTGACCTATATCTGGAAACATGCTAGCACACATAGCGAGAAGAATTGGTCATTTCCATGGCCATCAGATCTCAAGTGCAATTCTACGGCGCATGCGGGCATCACTCAAGACCATCAATCCCATCTCgGCAATTTCACTGTGGACGTTTTCATCTCAGCTGCAGGACTTCAGCCAACCCAACCCATCTTGGAGTCCAGAGATGCGCAAGTTTTATGACCATTATAATGCACAGTGTGACACTGACACTGAAACATATGAGAATAAAACTGGGCCTTGGAGGAAGTTGCCCAGCTACAACCGCTCCATTAAACATGCTACTGGTGGCATATACATCAGCAAACTGATCCAGGCCAAAGCTCGACTTTTCACGAGAAGTGTTAATGAGCAAGGTGCAACATTTGAATATGTGGCATTTTTCAATAAGGAGGAAAAAATCTGCATTTGTCTGTTCCAGCCAGGACATTTACTAGAGGGTGCACCTGGACATGTACATGGTGGAGCCATAGCCACAATGATTGACACAGTAACAGGTACGCTTGCTGGCTACCTGTCAGGACCCAGTGTGACTGCCAATCTCAACATAAACTATCGCAGTCCAGTACCTCTGGGTAGTGTGGTTATAATCCACTGTGCTCTAGATCGAATAGAGGGGAGGAAAACATTCATTACTTGCAAAGTGACCAGCACTGATGAGTCCAAAGTCTACACCGAGGCCACAGTTCTATTTGTTTCAATCAAATTGGGCAGTTTATTTGGATAACAAAGCTGGATCATCCAGGATTCCACTACTGAGTCCTAAATACAGTATATGTGCATATCTGTGCATATATGAGTGAGTGTGTTCCTGACATGGAGTGAGCAACTGATCAAGCTGGTGTTCTGCAGAGCTTAAGATCTCATAATGTGGTATTCAAGTGTGCATGTACGCAGTGATTTTACACATGactgattcattttttatttttatattttaaaagttaaatagacTTATTACCCTGGTATATTTATTGATTTGGTATTTATTGGTTTTAAATAGTTTTGCTTTTAACTACTTCAAATTTAAAGTGCTTAGTACTATAAGTATTGATTATATTTTTACCAATGCTTTGAGTAATAAGTGAAAGAAAATTTCATGCTCTGTTTTCAATAGAAAGTTGTACatgtaaatatttaatgatataaaataataattgtagtaGTAATAATTATAAGCAATAATGGTATATTTATGTTTGCCTTAATGTATGCCATTAAAGCCATTAAACAAA
>TCONS_00019615
GAATGTCACCGGCTGATCTTCTATTTTCAGCTGTTTAGTGACATTGGTTTTGTACAGTATTTGACAAGCCGTTCTTTCTAATTTAGGATTGTTTTCATTTATGAAgctttaaatgaataaacagctAAAGCTTAATAAGTAGTTGTTAGCTGTGTGCTATTGCTTTTGGCTGGCAGACATCGCGCGAGGGAATGCTTTAAACTGACCTATATCTGGAAACATGCTAGCACACATAGCGAGAAGAATTGGTCATTTCCATGGCCATCAGATCTCAAGTGCAATTCTACGGCGCATGCGGGCATCACTCAAGACCATCAATCCCATCTCgCTGCAGGACTTCAGCCAACCCAACCCATCTTGGAGTCCAGAGATGCGCAAGTTTTATGACCATTATAATGCACAGTGTGACACTGACACTGAAACATATGAGAATAAAACTGGGCCTTGGAGGAAGTTGCCCAGCTACAACCGCTCCATTAAACATGCTACTGGTGGCATATACATCAGCAAACTGATCCAGGCCAAAGCTCGACTTTTCACGAGAAGTGTTAATGAGCAAGGTGCAACATTTGAATATGTGGCATTTTTCAATAAGGAGGAAAAAATCTGCATTTGTCTGTTCCAGCCAGGACATTTACTAGAGGGTGCACCTGGACATGTACATGGTGGAGCCATAGCCACAATGATTGACACAGTAACAGGTACGCTTGCTGGCTACCTGTCAGGACCCAGTGTGACTGCCAATCTCAACATAAACTATCGCAGTCCAGTACCTCTGGGTAGTGTGGTTATAATCCACTGTGCTCTAGATCGAATAGAGGGGAGGAAAACATTCATTACTTGCAAAGTGACCAGCACTGATGAGTCCAAAGTCTACACCGAGGCCACAGTTCTATTTGTTTCAATCAAATTGGGCAGTTTATTTGGATAACAAAGCTGGATCATCCAGGATTCCACTACTGAGTCCTAAATACAGT

Function

symbol description
them4 Orthologous to several human genes including THEM4 (thioesterase superfamily member 4).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0003674 molecular_function molecular_function

KEGG:

id description
ko00062 Fatty acid elongation
ko04151 PI3K-Akt signaling pathway

ZFIN:

id description
ZDB-GENE-070112-982 Orthologous to several human genes including THEM4 (thioesterase superfamily member 4).

Ensembl:

ensembl_id ENSDARG00000061621

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019614 False 1516 mRNA 0.39 7 17763848 17798412
TCONS_00019615 True 977 mRNA 0.44 7 17763895 17797950

Neighbor

gene id symbol gene type direction distance location
XLOC_009822 si:dkey-87o1.2 coding upstream 44056 17714664 ~ 17719792 (+)
XLOC_009821 NA coding upstream 93391 17669300 ~ 17670457 (+)
XLOC_009820 NA coding upstream 96917 17665762 ~ 17666931 (+)
XLOC_009819 NA coding upstream 161948 17600877 ~ 17601900 (+)
XLOC_009818 FP015958.1 coding upstream 192914 17570810 ~ 17570934 (+)
XLOC_009824 rorc coding downstream 115524 17913936 ~ 18088024 (+)
XLOC_009825 si:dkey-17m8.2 coding downstream 343715 18142127 ~ 18153001 (+)
XLOC_009826 NA coding downstream 704154 18502566 ~ 18512199 (+)
XLOC_009827 rxrbb coding downstream 736422 18534834 ~ 18572875 (+)
XLOC_009828 slc6a19b coding downstream 1175652 18974064 ~ 18998549 (+)
XLOC_009817 NA non-coding upstream 212789 17548791 ~ 17551059 (+)
XLOC_009831 NA non-coding downstream 1577222 19375634 ~ 19412421 (+)
XLOC_009832 NA non-coding downstream 1582454 19380866 ~ 19381292 (+)
XLOC_009833 NA non-coding downstream 1710326 19508738 ~ 19513991 (+)
XLOC_009837 BX005389.4 non-coding downstream 1888301 19686713 ~ 19715210 (+)

Expression


Co-expression Network