Gene
RNA
| Item | Value |
|---|---|
| gene id | G226645 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 2063410 ~ 2063725 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257173 | True | 316 | lncRNA | 0.39 | 1 | 2063410 | 2063725 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_02032534_02040859 | DHX40 | coding | downstream | 21973 | 2032380 ~ 2041437 (-) |
| CI01000053_02029813_02031204 | CLTCB, CLTC | coding | downstream | 31620 | 2029813 ~ 2031790 (-) |
| CI01000053_02003828_02014352 | CLTC | coding | downstream | 49058 | 2002910 ~ 2014352 (-) |
| CI01000053_01982526_02001150 | VMP1 | coding | downstream | 62260 | 1982302 ~ 2001150 (-) |
| CI01000053_01964024_01971099 | RPS6KB1B, RPS6KB1 | coding | downstream | 92311 | 1963414 ~ 1971099 (-) |
| CI01000053_02109802_02117454 | NA | coding | upstream | 45446 | 2109171 ~ 2117957 (-) |
| CI01000053_02122241_02132642 | CLPTM1 | coding | upstream | 57904 | 2121629 ~ 2132787 (-) |
| CI01000053_02145248_02149126 | NA | coding | upstream | 81453 | 2145178 ~ 2149381 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | coding | upstream | 161485 | 2225210 ~ 2226481 (-) |
| CI01000053_02241056_02246083 | GDPD1 | coding | upstream | 176838 | 2240563 ~ 2246301 (-) |
| G226542 | NA | non-coding | downstream | 131530 | 1931548 ~ 1931880 (-) |
| G226553 | NA | non-coding | downstream | 132073 | 1929839 ~ 1931337 (-) |
| G226614 | NA | non-coding | downstream | 286752 | 1776450 ~ 1776658 (-) |
| G226609 | NA | non-coding | downstream | 315323 | 1747880 ~ 1748087 (-) |
| G226647 | NA | non-coding | upstream | 4806 | 2068531 ~ 2068740 (-) |
| G226649 | NA | non-coding | upstream | 19653 | 2083378 ~ 2083915 (-) |
| G226543 | NA | non-coding | upstream | 39668 | 2103393 ~ 2104463 (-) |
| G226657 | NA | non-coding | upstream | 42497 | 2106222 ~ 2106444 (-) |
| G226658 | NA | non-coding | upstream | 43005 | 2106730 ~ 2107029 (-) |
| G225812 | NA | other | downstream | 596678 | 1459595 ~ 1466732 (-) |
| G225574 | NA | other | downstream | 1516542 | 543647 ~ 546868 (-) |
| G226826 | NA | other | upstream | 502167 | 2565892 ~ 2567072 (-) |
| G226963 | NA | other | upstream | 932992 | 2996717 ~ 2997268 (-) |
| CI01000053_03551506_03551965 | NA | other | upstream | 1486608 | 3550333 ~ 3552847 (-) |
| G227604 | NA | other | upstream | 2023512 | 4087237 ~ 4087740 (-) |
