XLOC_009826


Basic Information

Item Value
gene id XLOC_009826
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 18502566 ~ 18512199 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021703
TAACCAAGGTTACCAGAAAGTAATATGAcataatttagttaaaaaatataaagagaTAATAATAGGAAAAGTATTGACAACTAATGAAAGGGACTTAAATTGTagtgtaaaatataaattttcgaTTATTATGTGTCCTTAGTTGATGGTTAATGTAGCCAATCATTAGGCGTTTTCATTtttaagggGCCAATAAGGATACAGAATGCGGCACCACAGATTAGTTGTTTTCCGGATTTTACACGAGGTGTTTCAGTGAAGTGTAGCAGCGCGATCTCTCGCATGGATTTGTGAACTGAACGCGGTGATTAAGTGAAGTGCAGCGGCGCAGCGTGATCTCTCGCATGGATTTGTGATCGAGCACGGTGTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021703 True 370 lncRNA 0.38 2 18502566 18512199

Neighbor

gene id symbol gene type direction distance location
XLOC_009825 si:dkey-17m8.2 coding upstream 349565 18142127 ~ 18153001 (+)
XLOC_009824 rorc coding upstream 414542 17913936 ~ 18088024 (+)
XLOC_009823 them4 coding upstream 704154 17763848 ~ 17798412 (+)
XLOC_009822 si:dkey-87o1.2 coding upstream 782774 17714664 ~ 17719792 (+)
XLOC_009821 NA coding upstream 832109 17669300 ~ 17670457 (+)
XLOC_009827 rxrbb coding downstream 22635 18534834 ~ 18572875 (+)
XLOC_009828 slc6a19b coding downstream 461865 18974064 ~ 18998549 (+)
XLOC_009829 si:ch211-254p10.2 coding downstream 500819 19013018 ~ 19023116 (+)
XLOC_009830 rapgef5b coding downstream 517098 19029297 ~ 19151800 (+)
XLOC_009831 NA coding downstream 863435 19375634 ~ 19412421 (+)
XLOC_009820 NA non-coding upstream 835635 17665762 ~ 17666931 (+)
XLOC_009819 NA non-coding upstream 900666 17600877 ~ 17601900 (+)
XLOC_009818 FP015958.1 non-coding upstream 931632 17570810 ~ 17570934 (+)
XLOC_009817 NA non-coding upstream 951507 17548791 ~ 17551059 (+)
XLOC_009832 NA non-coding downstream 868667 19380866 ~ 19381292 (+)
XLOC_009833 NA non-coding downstream 996539 19508738 ~ 19513991 (+)
XLOC_009837 BX005389.4 non-coding downstream 1174514 19686713 ~ 19715210 (+)
XLOC_009838 BX005389.1 non-coding downstream 1192225 19704424 ~ 19704538 (+)

Expression


Co-expression Network