G226862


Basic Information

Item Value
gene id G226862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 2593320 ~ 2595466 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU257403
TGACAGGCCGCTTTTGTCAATGGCGGTACCTGAGTAGGCATATGGAATATGTGCAAACTATCAATTGATCAAGTGCTGATATCAGAATTTCAAAAAAAGGCAAAAACAGACACATGCAAATTAATTCTACTCCGAAATAGCAGACAGGAAGACGGCAAATACATCTGTTGTGCGATCAAACCTTAACTACTTCTTACATTCAGAAACCTGCTCTGCAGACAATTACATGAAAAGACTTGACAACATGTTATTAGCTTGAAGGAGTTAGTATTTTGTAATATGACTTACATAGGATGGGTTTTTGCTCTTAAACTTTATTATATGTGCATCTCAATTACATACATCTAGTCCATTGTATATTCACATTTCCAATAGTTCTCTCAAATGCAATACCTCAAACATCAAATGAAAAGAAAATATACATTTACTGCAGAGGTAATCAGACGAAAACACTCCTATAACAACAGAACGCTTCAAATCAAACTATACAGACCCACCTCCATACAACCAAATGTGCTTCTATGCTTTGCCCCAATACCCCAAAAATGACATACAGCGCATGGCATTCAATATATTACAGCACTAAGTCACCAAAAATATATCCATTTATAGCAGACATGTGTGCTGGTCAATACTTCACATTTTCTGACTTCCTTTATTATGCTTTTTTGTTCATTTTTTTAAACTTTTTACAACATATGTGCTAGGAAAAACCTGCAAGGACCATTAACAAAAACTTGGGGCCTCTAATGAAAAGCAATTTAACTGCAACATGTACACAAGTAGTATGGGATATGATCCATGCAGTTGTGCACAGCCAGCATAGTCATGGTATGGTCTCGTTTAATATTCGTAGATGACATAAGCCACCAGTGCATCACAGTCTTCATTGGAGATACATTCTACGGTCTGGTCCGGTCTAGACTCAGCCAGACTTGAAGAGGAGAATGGCCACCTGGCCCAAGTAGAAGTAGATGAAGTGTTTTGTCTCATGGGTCACGTAGCTGCCGAAGTTCCTTCCCACAATGCAATGCCACGTAGGATTGTATTTCTTATCGAACTCCTTTTGATGTATGCGGCAATGTCCTTCTCTATGTTGTATTTCTCCATGGCCTGTGTAGCACAGTCCACCGCATCCTGCTGCATGTCTTCAGACATGTCGGCGTTCTTGATCACAGCCTTCCTGTCGGTCATGGTGCCTGTCAACAATATTTGGCAAGAAAAATTTGCAGCTCAAAACAGTCGCCGTACGAGCTTTCGTCGTTTCGGATGTCCCTTTGACGTTAGGAGAAGAACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257403 True 1299 lncRNA 0.40 3 2593320 2595466

Neighbor

gene id symbol gene type direction distance location
CI01000053_02533620_02536887 NA coding downstream 55480 2533593 ~ 2537840 (-)
CI01000053_02497603_02508436 NA coding downstream 84597 2497590 ~ 2508723 (-)
CI01000053_02486308_02487685 NA coding downstream 105290 2485144 ~ 2488030 (-)
CI01000053_02449164_02455151 NA coding downstream 138169 2449016 ~ 2455151 (-)
CI01000053_02427507_02435639 FLOT2A, FLT2, FLOT2B, FLOT2 coding downstream 157681 2427507 ~ 2435639 (-)
CI01000053_02694095_02694625 DUSP14 coding upstream 97932 2693398 ~ 2696172 (-)
CI01000053_02716472_02737494 TADA2A coding upstream 120546 2716012 ~ 2737577 (-)
CI01000053_02739707_02746533 NA coding upstream 144028 2739494 ~ 2746582 (-)
CI01000053_02753283_02763401 NA coding upstream 157612 2753078 ~ 2763797 (-)
CI01000053_02817187_02856529 TRAF4A, TRAF4 coding upstream 220400 2815866 ~ 2856648 (-)
G226834 NA non-coding downstream 24392 2568685 ~ 2568928 (-)
G226833 NA non-coding downstream 25591 2567473 ~ 2567729 (-)
G226829 NA non-coding downstream 29957 2560910 ~ 2563363 (-)
G226719 NA non-coding downstream 271269 2321795 ~ 2322051 (-)
G226847 NA non-coding upstream 116721 2712187 ~ 2715746 (-)
G226848 NA non-coding upstream 153112 2748578 ~ 2751192 (-)
G226906 NA non-coding upstream 169647 2765113 ~ 2765353 (-)
G226919 NA non-coding upstream 171786 2767252 ~ 2767502 (-)
G226826 NA other downstream 26248 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 355924 2225210 ~ 2226481 (-)
G225812 NA other downstream 1126588 1459595 ~ 1466732 (-)
G225574 NA other downstream 2046452 543647 ~ 546868 (-)
G226963 NA other upstream 401251 2996717 ~ 2997268 (-)
CI01000053_03551506_03551965 NA other upstream 954867 3550333 ~ 3552847 (-)
G227604 NA other upstream 1491771 4087237 ~ 4087740 (-)
G228651 NA other upstream 3189017 5784483 ~ 5787690 (-)
G228750 NA other upstream 3336126 5931592 ~ 5932241 (-)

Expression


Co-expression Network