G226925


Basic Information

Item Value
gene id G226925
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 2777975 ~ 2778676 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU257476
TTGTTACCATGTTTTACCATGACTAATATCGATCTAACTTACTGGAGTGTGCAACAAGTGTCTCATAGCAGCCGCCGAGCGAATGCAGAGTAGCATTATAACAACTTTCAAGTCAAATATATCTAATATGATAAACAGTGCTTCGTTACCCCACATACGCTAGACCGAAAAAAGCGGAAGCGGCGACAGTGGCATAATAAAAATTCCGCTGCTCTCGAGACGTGTGTCGTGTTCGTCACTTATTAGCAATCGCTCCAGCAGTCTCGTTCAACTCCAACATCACTCGGCCCTGCTCTGCTTCATACCACAGTAACATTAATACTCTCATCCATAAACATGATTTCTGACGAGTCCCGTCCTGGCTGTAGACGTGAAGACAACACATACCATGATTCCACGAAATCAAGGATAAGCGACTGAATAAGCGACCTCTAGCGGCGAAAATTTACATATTGTGGCTTTAACAGATCTAATATTCACATATCCCTGTGATCTCCCAAATGAAGGTTAGTTTTAAAGTAACCCACAGTTTAATGTTTAACAGTTTGCAAATGACTCATAATTTAGTTACTTGGTGTTTGGTAACGAAGGGCCTACTTTGCATCAGCAACACTGACTCAATGACAAACAAGTCATTCATAAGATAACTGATGGCACCTGTATTCATAGCAACTAGTTTCTAACTAATTAATCATTTGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257476 True 702 lncRNA 0.40 1 2777975 2778676

Neighbor

gene id symbol gene type direction distance location
CI01000053_02753283_02763401 NA coding downstream 14178 2753078 ~ 2763797 (-)
CI01000053_02739707_02746533 NA coding downstream 31393 2739494 ~ 2746582 (-)
CI01000053_02716472_02737494 TADA2A coding downstream 40398 2716012 ~ 2737577 (-)
CI01000053_02694095_02694625 DUSP14 coding downstream 81803 2693398 ~ 2696172 (-)
CI01000053_02533620_02536887 NA coding downstream 240135 2533593 ~ 2537840 (-)
CI01000053_02817187_02856529 TRAF4A, TRAF4 coding upstream 37190 2815866 ~ 2856648 (-)
CI01000053_02862161_02873752 NEK8 coding upstream 83055 2861731 ~ 2873752 (-)
CI01000053_02905181_02934126 GDPD5A, GDPD5B, GDPD5 coding upstream 125999 2904675 ~ 2934126 (-)
CI01000053_02968381_02979969 GUCY2F coding upstream 189547 2968223 ~ 2980046 (-)
CI01000053_03013700_03026612 RAP1GAP2, RAP1GAP2A coding upstream 235024 3013700 ~ 3026612 (-)
G226919 NA non-coding downstream 10473 2767252 ~ 2767502 (-)
G226906 NA non-coding downstream 12622 2765113 ~ 2765353 (-)
G226848 NA non-coding downstream 26783 2748578 ~ 2751192 (-)
G226847 NA non-coding downstream 62229 2712187 ~ 2715746 (-)
G226914 NA non-coding upstream 62947 2841623 ~ 2846182 (-)
G226946 NA non-coding upstream 179658 2958334 ~ 2961225 (-)
G226967 NA non-coding upstream 257919 3036595 ~ 3046469 (-)
G227003 NA non-coding upstream 402669 3181345 ~ 3181577 (-)
G227004 NA non-coding upstream 403327 3182003 ~ 3182298 (-)
G226826 NA other downstream 210903 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 540579 2225210 ~ 2226481 (-)
G225812 NA other downstream 1311243 1459595 ~ 1466732 (-)
G225574 NA other downstream 2231107 543647 ~ 546868 (-)
G226963 NA other upstream 218041 2996717 ~ 2997268 (-)
CI01000053_03551506_03551965 NA other upstream 771657 3550333 ~ 3552847 (-)
G227604 NA other upstream 1308561 4087237 ~ 4087740 (-)
G228651 NA other upstream 3005807 5784483 ~ 5787690 (-)
G228750 NA other upstream 3152916 5931592 ~ 5932241 (-)

Expression


Co-expression Network