Gene
RNA
| Item | Value |
|---|---|
| gene id | G227042 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 3222238 ~ 3308690 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257620 | True | 901 | lncRNA | 0.31 | 3 | 3222238 | 3308690 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_03142995_03145565 | ARHGEF26 | coding | downstream | 76673 | 3142995 ~ 3145565 (-) |
| CI01000053_03120615_03122486 | NA | coding | downstream | 99752 | 3119935 ~ 3122486 (-) |
| CI01000053_03072131_03076683 | NA | coding | downstream | 145555 | 3071989 ~ 3076683 (-) |
| CI01000053_03013700_03026612 | RAP1GAP2, RAP1GAP2A | coding | downstream | 195626 | 3013700 ~ 3026612 (-) |
| CI01000053_02968381_02979969 | GUCY2F | coding | downstream | 242192 | 2968223 ~ 2980046 (-) |
| CI01000053_03403259_03403534 | NA | coding | upstream | 94347 | 3403037 ~ 3404029 (-) |
| CI01000053_03456147_03457909 | NA | coding | upstream | 147345 | 3456035 ~ 3458199 (-) |
| CI01000053_03499011_03502122 | NA | coding | upstream | 189708 | 3498398 ~ 3502263 (-) |
| CI01000053_03551506_03551965 | NA | coding | upstream | 242628 | 3550333 ~ 3552847 (-) |
| CI01000053_03558891_03566444 | NA | coding | upstream | 250093 | 3558783 ~ 3569352 (-) |
| G227004 | NA | non-coding | downstream | 39940 | 3182003 ~ 3182298 (-) |
| G227003 | NA | non-coding | downstream | 40661 | 3181345 ~ 3181577 (-) |
| G226967 | NA | non-coding | downstream | 175769 | 3036595 ~ 3046469 (-) |
| G226946 | NA | non-coding | downstream | 261013 | 2958334 ~ 2961225 (-) |
| G226914 | NA | non-coding | downstream | 376056 | 2841623 ~ 2846182 (-) |
| G227049 | NA | non-coding | upstream | 87078 | 3395768 ~ 3490909 (-) |
| G227174 | NA | non-coding | upstream | 96458 | 3405148 ~ 3428322 (-) |
| G227184 | NA | non-coding | upstream | 104811 | 3413501 ~ 3420816 (-) |
| G227047 | NA | non-coding | upstream | 176173 | 3484863 ~ 3547141 (-) |
| G227225 | NA | non-coding | upstream | 232066 | 3540756 ~ 3541322 (-) |
| G226963 | NA | other | downstream | 224970 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 655166 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 984842 | 2225210 ~ 2226481 (-) |
| G225812 | NA | other | downstream | 1755506 | 1459595 ~ 1466732 (-) |
| G225574 | NA | other | downstream | 2675370 | 543647 ~ 546868 (-) |
| G227604 | NA | other | upstream | 778547 | 4087237 ~ 4087740 (-) |
| G228651 | NA | other | upstream | 2475793 | 5784483 ~ 5787690 (-) |
| G228750 | NA | other | upstream | 2622902 | 5931592 ~ 5932241 (-) |
