XLOC_000983 (radil)


Basic Information

Item Value
gene id XLOC_000983
gene name radil
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7847787 ~ 7894255 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001557
GCAGTCGGCTCAGGGAATGCAGACGCCGAAGCATGCAGACTGTAGTGTAGCCAGACTGGCACATAAAAGGGGGGAAAGGGGATAAACAGCTCCAGCGACCGGCTAGAAGCAGCGGCGACCGACAAAAGCGGCAGGTAGACGTTGTCGCATTCCATGACAGTGACTGGGCGGACCTAAACTGTCTCCCACCGGCCCGTAGAGCTCATTTAACACATGAACAAGGAGAAATACTGGCAAATGTCAATAATAGGAGTCAAGCGAGCGGCTTGTGAGGGATCAGAGCTCTGAGACTGGCTGGCGGAGCCCCGTTAAGACGCACAAGCGGATTAGGACTCGCGAGCAGGTGCCTTTGTTGGCTCGCGCCGTTGCCAGTGGAGACCCGCAGTAGCCCGACGCGCTTCTGTAAAATTAATGCCTGCAAATGAGCGTCTCTTCAGTGCACGGAGGATAACACGCGTCTGACAGTTCTAGGAGTTTTTAACCAATGCAAGTCCCGGCACCATGTTCTACGGTTCCTCATCTGCCAGCATGTCTCTGCCCTCCAAGAACCGCCTGAAGCGCCAGAGTCGCACTTTTACGCAGGTTCTGTACCGGACACTGAGTTACCGGGACCGCCGCTCTGTGACCGACTTACCTGAGCAGGTGCGTGATGATCCAGCGGAGCTCTCCACCCAATCCTCCGCCCCAGGTGTGCTGAAGATATTTGGTGATGAAATCAGTGCCGGCGCCAATTACAAAAGTGTTCTTGCTACACCTCGCTCCAGCGCCCAAGAGCTGATCAAAGAGGCGCTTGAGCGTTACTCTCTGAACAAGACCTCTGCCTGTAATTTTGTGTTGTGTGATGTGATCGGACGGTTTGAGGGTCCTGACCGGCGGTGGCGGACTGAGTGTCTTCGGGCGCTGGGAAACAATGAAAAGCCCCTTCTCCTGCAGGACCTCTGGAAGCCGAAGGAAGGTTTCTCCCGCCGCTTTGAGCTCAGACGGAGAGCTGAAGTAGAGGAGCTGGCAGCAAAAGAGAAGGACACAGTCACCGCAGATATCAATGCGCAAGCGAGGAAGCTGCAGAGAAACCGAGCCAAAGGAACGATGACTCTCCAGCACGGCTCCTCGTTCTGCCGCAGCCTCAGTGAAACCAGCCTTAACCTGGTGGGTTTGCCTGGTGAAGAACCCAAACGCTACTACTCCACCCTCCCTGGACCCATCAGGACACGCTCCGCACGGGACTCTGAGATCCGCAAAGAGAGAGATGGAGGAGGAGTAAAGCACTCGCTCTACCAGTCGCCACACCTGCTGCTCCTTCAGGGCTACAACCAACAGGATTGCCTGGTTTACCTGTTGAACCGAGAGCAGCACACAGTTGGTCAGGAAACAGCATCAGCACGGCCAAATATCTGCCTGTCATCTCCGGATGTGCTTCCACTTCACTGCCGAATTCGTCGTGCTGCGCAAAGGCGCTCTTCCCCAGACCAGCGGCTTCTCCTGGAGCCCGTTGCTCATGGGAATGTGTTGGTAAACTTCATGCGAATTGAGCGTCCCACACCCCTCCGTCACGGGGATTTGCTGTCCTTTGGTGCTCATTACATTTTCCTGTACAAAGATCCTCTGAGTGCTAAACCTCTCCCTGCCCAAACTCTCACCAGACTTCGTACCCTAGCAAAACTCTGCGATGGTGAGTCTGGAGGTTTGCCTGAGAAAGGAGATGCTTGTCGAATGTGTGGAGCTGTTTTACACGAACCGGCAGCATCCTCTAGACGTAGCTCTAAAGCTCCAGCACGAGGGTCACAGAAACGAAAGCTGGCGCTGGAATTTGAGCGGGCTCACGAGGACGCACTGGTGAACCGGGTGCTGACGCTCATCGAGCCCAGCGGGGACGACCACAAGCTGACACCAGCATATTTGCTTTGTCTATGCATCAAGCACTCAGCGAATACATTTCCACCCGGCAGCTTCGGCAAACTCTTACAGAAAATCGCCAAGAGGATTCAGACCATAGCATGGGAGAAGACAAAGGAGTTGGCACAGAAGCAAGCTCAGCATCAAGATCCTGCCTCGCTGTCTCTGCTCAGCATCTCAGACCTCGTACCAGATCTCCAGTTCATTTTCTTCTGGATGTCCAATGCCATCGAAATACTGTATTTTATCCAGCAGAAATCACCTGCGTACATGCAGACTATTGAGCTCATGGACGATAAAGCAGGATCCAAAGAATCTCTCCTCTCAGCAACAATATCAGCAAATGAAGAGGCGATGACCATACTGGAGGAAGTGATCATGTACACCTTTCAGCAGTGTGTCTACTACATCACTAAGACGTTGTATGTGGTGCTGCCGGGCCTGTTGGACTGTAACCCATTTGGGACGGAGCCTTCATCAGAGCAGTGCCGGCGGgctgcaggagtgtgtgtgtgtgcagtgtgtgtgatGCCAGAAGCCGTTCGCAGGGTGGTCAGTGTGTTTCAAACCACATCAGACCTGCTCCAGCAGTACCAGGTTCATTCAGAGATTCAGAGTCAGATGTTCGCCTACCTCTTCTTCTTCACCAACGTCTCGCTCTTTAATCAACTCATCGATAAAGGTCCCGCTCGTGGCTGGTTTCAGCGCTCTCGTGTCCTGCAGATCCAGGCGAGTGTGAAGATTTTGTTAGACTGGGCTAAAGGAGCAGGTCATAATCATCTTGCACAGAAATTCTTTGCTAAATTCTGTAGCACAGTGACCATCCTGGCCTCGCCTCCACAGCAGCTTTCACAGATGAGCTGGAAAGCCTTATGTGCAGAGCATCCGTCTCTAAAGCCTGTCCAGCTTCACAGAATCCTCACTCAATACCAGCTCATGGCTGAACTTGGGCCTCTACCAATCTGGCAACCCAGCAGTGAAGATGAGGCCTATATCTACAGAACAGTTGATCTACTGGAGAGCTTTGAGAATCACCCTCCTATTGTGCTGCCAAGTGCTGGGTTTAAGGTGGATTTGGAGAGTGACTGTGTGGAGGACAGTATTTATCGTCAGCTGCTTTACGTTCGTCACTTTGTTTGGGGGCTTCGCACTAAAACTCATCCATCTAATGGCTGTACAGACCGACAGGATGCCCagCGTGAGCCTCCGCAGCCTCACTCCAGTCCTCATCCGGCTCCATCTGTCCGCGGGGAAGGAGAAGGCGAGGTGCGCAGCTCCTCCACGACTCTTGGAGGAAGAGGAGAAGGAGCAGGAGCCGAAGACCGAACACGGGACAAACCAACACACGGCATTCACTACAGAAACGGCTCCGGCGCCCGTTATGCCAACCAAAGCCAAGCCACAGACTCTTCCTGTATACTGACTCCACCAAACACCCCGCTCTATCCGGAACACACGTACATACAGTCCAACACAGCGCACTACCCGGAGCATGCTTCACaagagcacacacatacacactcgcacACTAAGACCAATGGTTGCATGCGTTCTACTCCTGAGCACAAGAAAATCAATGGCTTCATCAGCAATGGCATTGAAGGCCCTTTGAGTGGTTGTGGTTTTCCTTTCCCTGTCCCTGTGTCTCATCTGGGCCCAAAGTCTGATGATATCTGTTCCGTCTTTGTAGTGGACCTGGATAAAGGACCGTACGGCCTGGGAATGGGACTGATCGATGGACTTCACACCCCTCTGAACTCTCCTGGAATCTACATCAGGACTCTGATTCCAGATGGACCTGCTGCTGCAGATGGACGACTCTGCATCGGTGACAGGATCCTGGCAGTGAACGGAACCAGTCTCATTGGAGCAGACTATCAGAGTGCTGTGGATTTGATTCGTCTGGGGGGAGGACGGCTCCGGTTTCTTGTCGCCAAATCAGATCTCGAAGTATCAGAGAAGATCAGTGCCTCTTCCTGCTGAGAGAGAGGCTGCAAGTGTGACCCTCTACCTAGACGAAATATGAGGAGGACAGAGAGTCCTCAGTCTCGAGACTGGAGAACAAGCACACTATAGGACCTCTCAGCGCCTACAGCCCCTCTGTCTCTTACACAGCCCTGTACAATACTGCACTCAatc
>TCONS_00001558
AGTGGAGACCCGCAGTAGCCCGACGCGCTTCTGTAAAATTAATGCCTGCAAATGAGCGTCTCTTCAGTGCACGGAGGATAACACGCGTCTGACAGTTCTAGGAGTTTTTAACCAATGCAAGTCCCGGCACCATGTTCTACGGTTCCTCATCTGCCAGCATGTCTCTGCCCTCCAAGAACCGCCTGAAGCGCCAGAGTCGCACTTTTACGCAGGTTCTGTACCGGACACTGAGTTACCGGGACCGCCGCTCTGTGACCGACTTACCTGAGCAGGTGCGTGATGATCCAGCGGAGCTCTCCACCCAATCCTCCGCCCCAGGTGTGCTGAAGATATTTGGTGATGAAATCAGTGCCGGCGCCAATTACAAAAGTGTTCTTGCTACACCTCGCTCCAGCGCCCAAGAGCTGATCAAAGAGGCGCTTGAGCGTTACTCTCTGAACAAGACCTCTGCCTGTAATTTTGTGTTGTGTGATGTGATCGGACGGTTTGAGGGTCCTGACCGGCGGTGGCGGACTGAGTGTCTTCGGGCGCTGGGAAACAATGAAAAGCCCCTTCTCCTGCAGGACCTCTGGAAGCCGAAGGAAGGTTTCTCCCGCCGCTTTGAGCTCAGACGGAGAGCTGAAGTAGAGGAGCTGGCAGCAAAAGAGAAGGACACAGTCACCGCAGATATCAATGCGCAAGCGAGGAAGCTGCAGAGAAACCGAGCCAAAGGAACGATGACTCTCCAGCACGGCTCCTCGTTCTGCCGCAGCCTCAGTGAAACCAGCCTTAACCTGGTGGGTTTGCCTGGTGAAGAACCCAAACGCTACTACTCCACCCTCCCTGGACCCATCAGGACACGCTCCGCACGGGACTCTGAGATCCGCAAAGAGAGAGATGGAGGAGGAGTAAAGCACTCGCTCTACCAGTCGCCACACCTGCTGCTCCTTCAGGGCTACAACCAACAGGATTGCCTGGTTTACCTGTTGAACCGAGAGCAGCACACAGTTGGTCAGGAAACAGCATCAGCACGGCCAAATATCTGCCTGTCATCTCCGGATGTGCTTCCACTTCACTGCCGAATTCGTCGTGCTGCGCAAAGGCGCTCTTCCCCAGACCAGCGGCTTCTCCTGGAGCCCGTTGCTCATGGGAATGTGTTGGTAAACTTCATGCGAATTGAGCGTCCCACACCCCTCCGTCACGGGGATTTGCTGTCCTTTGGTGCTCATTACATTTTCCTGTACAAAGATCCTCTGAGTGCTAAACCTCTCCCTGCCCAAACTCTCACCAGACTTCGTACCCTAGCAAAACTCTGCGATGGTGAGTCTGGAGGTTTGCCTGAGAAAGGAGATGCTTGTCGAATGTGTGGAGCTGTTTTACACGAACCGGCAGCATCCTCTAGACGTAGCTCTAAAGCTCCAGCACGAGGGTCACAGAAACGAAAGCTGGCGCTGGAATTTGAGCGGGCTCACGAGGACGCACTGGTGAACCGGGTGCTGACGCTCATCGAGCCCAGCGGGGACGACCACAAGCTGACACCAGCATATTTGCTTTGTCTATGCATCAAGCACTCAGCGAATACATTTCCACCCGGCAGCTTCGGCAAACTCTTACAGAAAATCGCCAAGAGGATTCAGACCATAGCATGGGAGAAGACAAAGGAGTTGGCACAGAAGCAAGCTCAGCATCAAGATCCTGCCTCGCTGTCTCTGCTCAGCATCTCAGACCTCGTACCAGATCTCCAGTTCATTTTCTTCTGGATGTCCAATGCCATCGAAATACTGTATTTTATCCAGCAGAAATCACCTGCGTACATGCAGACTATTGAGCTCATGGACGATAAAGCAGGATCCAAAGAATCTCTCCTCTCAGCAACAATATCAGCAAATGAAGAGGCGATGACCATACTGGAGGAAGTGATCATGTACACCTTTCAGCAGTGTGTCTACTACATCACTAAGACGTTGTATGTGGTGCTGCCGGGCCTGTTGGACTGTAACCCATTTGGGACGGAGCCTTCATCAGAGCAGTGCCGGCGGgctgcaggagtgtgtgtgtgtgcagtgtgtgtgatGCCAGAAGCCGTTCGCAGGGTGGTCAGTGTGTTTCAAACCACATCAGACCTGCTCCAGCAGTACCAGGTTCATTCAGAGATTCAGAGTCAGATGTTCGCCTACCTCTTCTTCTTCACCAACGTCTCGCTCTTTAATCAACTCATCGATAAAGGTCCCGCTCGTGGCTGGTTTCAGCGCTCTCGTGTCCTGCAGATCCAGGCGAGTGTGAAGATTTTGTTAGACTGGGCTAAAGGAGCAGGTCATAATCATCTTGCACAGAAATTCTTTGCTAAATTCTGTAGCACAGTGACCATCCTGGCCTCGCCTCCACAGCAGCTTTCACAGATGAGCTGGAAAGCCTTATGTGCAGAGCATCCGTCTCTAAAGCCTGTCCAGCTTCACAGAATCCTCACTCAATACCAGCTCATGGCTGAACTTGGGCCTCTACCAATCTGGCAACCCAGCAGTGAAGATGAGGCCTATATCTACAGAACAGTTGATCTACTGGAGAGCTTTGAGAATCACCCTCCTATTGTGCTGCCAAGTGCTGGGTTTAAGGTGGATTTGGAGAGTGACTGTGTGGAGGACAGTATTTATCGTCAGCTGCTTTACGTTCGTCACTTTGTTTGGGGGCTTCGCACTAAAACTCATCCATCTAATGGCTGTACAGACCGACAGGATGCCCagCGTGAGCCTCCGCAGCCTCACTCCAGTCCTCATCCGGCTCCATCTGTCCGCGGGGAAGGAGAAGGCGAGGTGCGCAGCTCCTCCACGACTCTTGGAGGAAGAGGAGAAGGAGCAGGAGCCGAAGACCGAACACGGGACAAACCAACACACGGCATTCACTACAGAAACGGCTCCGGCGCCCGTTATGCCAACCAAAGCCAAGCCACAGACTCTTCCTGTATACTGACTCCACCAAACACCCCGCTCTATCCGGAACACACGTACATACAGTCCAACACAGCGCACTACCCGGAGCATGCTTCACaagagcacacacatacacactcgcacACTAAGACCAATGGTTGCATGCGTTCTACTCCTGAGCACAAGAAAATCAATGGCTTCATCAGCAATGGCATTGAAGGCCCTTTGAGTGGTTGTGGTTTTCCTTTCCCTGTCCCTGTGTCTCATCTGGGCCCAAAGTCTGATGATATCTGTTCCGTCTTTGTAGTGGACCTGGATAAAGGACCGTACGGCCTGGGAATGGGACTGATCGATGGACTTCACACCCCTCTGAACTCTCCTGGAATCTACATCAGGACTCTGATTCCAGATGGACCTGCTGCTGCAGATGGACGACTCTGCATCGGTGACAGGATCCTGGCAGTGAACGGAACCAGTCTCATTGGAGCAGACTATCAGAGTGCTGTGGATTTGATTCGTCTGGGGGGAGGACGGCTCCGGTTTCTTGTCGCCAAATCAGATCTCGAAGTATCAGAGAAGATCAGTGCCTCTTCCTGCTGAGAGAGAGGCTGCAAGTGTGACCCTCTACCTAGACGAAATATGAGGAGGACAGAGAGTCCTCAGTCTCGAGACTGGAGAACAAGCACACTATAGGACCTCTCAGCGCCTACAGCCCCTCTGTCT
>TCONS_00001559
GCAGTCGGCTCAGGGAATGCAGACGCCGAAGCATGCAGACTGTAGTGTAGCCAGACTGGCACATAAAAGGGGGGAAAGGGGATAAACAGCTCCAGCGACCGGCTAGAAGCAGCGGCGACCGACAAAAGCGGCAGGTAGACGTTGTCGCATTCCATGACAGTGACTGGGCGGACCTAAACTGTCTCCCACCGGCCCGTAGAGCTCATTTAACACATGAACAAGGAGAAATACTGGCAAATGTCAATAATAGGAGTCAAGCGAGCGGCTTGTGAGGGATCAGAGCTCTGAGACTGGCTGGCGGAGCCCCGTTAAGACGCACAAGCGGATTAGGACTCGCGAGCAGGTGCCTTTGTTGGCTCGCGCCGTTGCCAGTGGAGACCCGCAGTAGCCCGACGCGCTTCTGTAAAATTAATGCCTGCAAATGAGCGTCTCTTCAGTGCACGGAGGATAACACGCGTCTGACAGTTCTAGGAGTTTTTAACCAATGCAAGTCCCGGCACCATGTTCTACGGTTCCTCATCTGCCAGCATGTCTCTGCCCTCCAAGAACCGCCTGAAGCGCCAGAGTCGCACTTTTACGCAGGTTCTGTACCGGACACTGAGTTACCGGGACCGCCGCTCTGTGACCGACTTACCTGAGCAGGTGCGTGATGATCCAGCGGAGCTCTCCACCCAATCCTCCGCCCCAGGTGTGCTGAAGATATTTGGTGATGAAATCAGTGCCGGCGCCAATTACAAAAGTGTTCTTGCTACACCTCGCTCCAGCGCCCAAGAGCTGATCAAAGAGGCGCTTGAGCGTTACTCTCTGAACAAGACCTCTGCCTGTAATTTTGTGTTGTGTGATGTGATCGGACGGTTTGAGGGTCCTGACCGGCGGTGGCGGACTGAGTGTCTTCGGGCGCTGGGAAACAATGAAAAGCCCCTTCTCCTGCAGGACCTCTGGAAGCCGAAGGAAGGTTTCTCCCGCCGCTTTGAGCTCAGACGGAGAGCTGAAGTAGAGGAGCTGGCAGCAAAAGAGAAGGACACAGTCACCGCAG

Function

symbol description
radil Predicted to enable GTPase binding activity. Acts upstream of or within neural crest cell migration. Predicted to be active in microtubule. Orthologous to human RADIL (Rap associating with DIL domain).

GO:

id name namespace
GO:0001755 neural crest cell migration biological_process
GO:0007275 multicellular organism development biological_process
GO:0007155 cell adhesion biological_process
GO:0007165 signal transduction biological_process
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-071206-1 Predicted to enable GTPase binding activity. Acts upstream of or within neural crest cell migration. Predicted to be active in microtubule. Orthologous to human RADIL (Rap associating with DIL domain).

Ensembl:

ensembl_id ENSDARG00000079779

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001557 False 4032 mRNA 0.53 16 7847787 7894255
TCONS_00001558 False 3629 mRNA 0.53 15 7847820 7893808
TCONS_00001559 True 1036 mRNA 0.56 3 7889110 7894255

Neighbor

gene id symbol gene type direction distance location
XLOC_000981 BX908756.3 coding downstream 3425 7771557 ~ 7844362 (-)
XLOC_000982 BX908756.2 coding downstream 46141 7801531 ~ 7801646 (-)
XLOC_000980 NA coding downstream 145931 7700023 ~ 7701856 (-)
XLOC_000979 arglu1b coding downstream 174411 7662091 ~ 7673376 (-)
XLOC_000978 efnb2b coding downstream 187917 7632119 ~ 7659870 (-)
XLOC_000984 mmd2b coding upstream 14027 7908282 ~ 7920702 (-)
XLOC_000985 CR855320.6 coding upstream 25864 7920119 ~ 7920206 (-)
XLOC_000986 si:dkey-79f11.10 coding upstream 30701 7924956 ~ 7930679 (-)
XLOC_000987 si:dkey-79f11.9 coding upstream 42015 7936270 ~ 7939514 (-)
XLOC_000988 si:dkey-79f11.8 coding upstream 52587 7946842 ~ 7951002 (-)
XLOC_000975 NA non-coding downstream 293448 7545049 ~ 7554339 (-)
XLOC_000974 CABZ01075316.1 non-coding downstream 705644 7142039 ~ 7142143 (-)
XLOC_000996 NA non-coding upstream 308135 8202390 ~ 8205228 (-)
XLOC_000998 NA non-coding upstream 610722 8504977 ~ 8510066 (-)
XLOC_001001 NA non-coding upstream 684900 8579155 ~ 8587359 (-)
XLOC_001002 NA non-coding upstream 718320 8612575 ~ 8625266 (-)

Expression


Co-expression Network