G226438


Basic Information

Item Value
gene id G226438
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 3534175 ~ 3541583 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU256931
CAAAAAAATAGCTGAATTTATTAAAATGACCCAGTTCAACCCAGTTTTCACCCCCGACTCTTAATGCATTGTGTTTCTTTCTGGAGCATCAGTGAATGTTTGAACCTTTTTTATTAGTTGTGTTTGAGTCCCTCAATTGTCCTCAGTGTGAAAAGATGGATCTCAAAATCATTCAGTCACTGCTGTAAAGGGTTCAAATATGCAAAAAATTCTCGAAAACTGAAGAATCTGCAGGACCTGGAGGATTTTTCTAAAGAACAGAGCTCAGTTTAACTGCTCAGAACAAACATCATAAAACAAAAAAACAGTCGTAGATCATTCAGGTAACCACACACAGTATTAAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256931 True 347 lncRNA 0.36 2 3534175 3541583

Neighbor

gene id symbol gene type direction distance location
CI01000053_03520283_03525417 NA coding upstream 8713 3520032 ~ 3525462 (+)
CI01000053_03484197_03496907 NA coding upstream 36345 3483730 ~ 3497830 (+)
CI01000053_03448295_03455864 NA coding upstream 78235 3447231 ~ 3455940 (+)
CI01000053_03405451_03427728 PDCD5.S, PDCD5 coding upstream 106027 3405052 ~ 3428148 (+)
CI01000053_03318431_03325229 NA coding upstream 208662 3317222 ~ 3325513 (+)
CI01000053_03545885_03548117 NA coding downstream 4302 3545885 ~ 3548789 (+)
CI01000053_03572527_03585944 NA coding downstream 30005 3571588 ~ 3586271 (+)
CI01000053_03587596_03590525 NA coding downstream 45199 3586782 ~ 3590558 (+)
CI01000053_03602535_03605174 NA coding downstream 60907 3602490 ~ 3605540 (+)
CI01000053_03670303_03671237 NA coding downstream 128401 3669984 ~ 3671268 (+)
G226392 NA non-coding upstream 22790 3508680 ~ 3511385 (+)
G226424 NA non-coding upstream 60580 3464216 ~ 3473595 (+)
G226426 NA non-coding upstream 61728 3472031 ~ 3472447 (+)
G226332 NA non-coding upstream 348452 3185514 ~ 3185723 (+)
G226451 NA non-coding downstream 36460 3578043 ~ 3578316 (+)
G226466 NA non-coding downstream 128335 3669918 ~ 3674199 (+)
G226397 NA non-coding downstream 156142 3697725 ~ 3700465 (+)
G226476 NA non-coding downstream 159457 3701040 ~ 3701264 (+)
CI01000053_03938224_03984584 RIMBP2 non-coding downstream 441752 3936823 ~ 3985703 (+)
G226347 NA other upstream 259264 3272374 ~ 3274911 (+)
G226292 NA other upstream 487392 3036602 ~ 3046783 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 938708 2592558 ~ 2595467 (+)
G225952 NA other upstream 1660880 1872874 ~ 1873295 (+)
G226399 NA other downstream 79215 3620798 ~ 3697529 (+)
G227317 NA other downstream 873368 4414951 ~ 4415593 (+)
G228257 NA other downstream 1833970 5375553 ~ 5378449 (+)
CI01000053_05471449_05512831 LRRC75B other downstream 1967661 5471449 ~ 5513074 (+)
CI01000053_06725452_06758944 NA other downstream 3181616 6725452 ~ 6758944 (+)

Expression


Co-expression Network