Gene
RNA
| Item | Value |
|---|---|
| gene id | G227236 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 3635717 ~ 3636283 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257874 | False | 246 | lncRNA | 0.37 | 2 | 3635717 | 3636139 |
| TU257876 | True | 248 | lncRNA | 0.37 | 2 | 3635717 | 3636283 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_03620673_03622682 | NA | coding | downstream | 13032 | 3620240 ~ 3622685 (-) |
| CI01000053_03592810_03602102 | NA | coding | downstream | 33280 | 3592655 ~ 3602437 (-) |
| CI01000053_03558891_03566444 | NA | coding | downstream | 66365 | 3558783 ~ 3569352 (-) |
| CI01000053_03551506_03551965 | NA | coding | downstream | 83521 | 3550333 ~ 3552847 (-) |
| CI01000053_03499011_03502122 | NA | coding | downstream | 133454 | 3498398 ~ 3502263 (-) |
| CI01000053_03665103_03666630 | NA | coding | upstream | 28307 | 3664590 ~ 3667700 (-) |
| CI01000053_03696522_03699590 | NA | coding | upstream | 60175 | 3696458 ~ 3699699 (-) |
| CI01000053_03823296_03825234 | NA | coding | upstream | 186811 | 3823094 ~ 3825328 (-) |
| CI01000053_04276080_04288879 | FAM101A | coding | upstream | 639757 | 4276040 ~ 4288879 (-) |
| CI01000053_04415119_04415646 | NA | coding | upstream | 778778 | 4415061 ~ 4415646 (-) |
| G227046 | NA | non-coding | downstream | 15540 | 3617608 ~ 3620177 (-) |
| G227069 | NA | non-coding | downstream | 29228 | 3603898 ~ 3606489 (-) |
| G227047 | NA | non-coding | downstream | 88576 | 3484863 ~ 3547141 (-) |
| G227225 | NA | non-coding | downstream | 94395 | 3540756 ~ 3541322 (-) |
| G227174 | NA | non-coding | downstream | 207395 | 3405148 ~ 3428322 (-) |
| G227051 | NA | non-coding | upstream | 70256 | 3706539 ~ 3707610 (-) |
| G227071 | NA | non-coding | upstream | 93195 | 3729478 ~ 3729711 (-) |
| G227053 | NA | non-coding | upstream | 97841 | 3734124 ~ 3745623 (-) |
| G227563 | NA | non-coding | upstream | 327447 | 3963730 ~ 3965498 (-) |
| G227573 | NA | non-coding | upstream | 349709 | 3985992 ~ 3990212 (-) |
| G226963 | NA | other | downstream | 638449 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 1068645 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 1398321 | 2225210 ~ 2226481 (-) |
| G225812 | NA | other | downstream | 2168985 | 1459595 ~ 1466732 (-) |
| G227604 | NA | other | upstream | 450954 | 4087237 ~ 4087740 (-) |
| G228651 | NA | other | upstream | 2148200 | 5784483 ~ 5787690 (-) |
| G228750 | NA | other | upstream | 2295309 | 5931592 ~ 5932241 (-) |
