G227051


Basic Information

Item Value
gene id G227051
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 3706539 ~ 3707610 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU257641
TAAGTTTTTGTGTGTATGAAAAACCTTACGTAAAAATACACACGTATTCTCATTAGATCACATTGAAACTGTTCTTCTTTTACAAGGGTACTAATGTGATAATACTACAATATAAAAACCCCCACATCCATGCAGGGGTCTGCATTTTTACACCACATGGTGTCCTACAGAGGATAACCGGCTGTCTATGTTACCATGTTTACCATTGTTTTACTATTCCAAGAGACAACTGAACAAACACAAGGCTGAATTGTAAAGGACAGATTGCCAATATTTATCTTTAAAGTCTTAAGCTTTGAATATGAGTAAAGATTTGATTCAAACTATTTTGTAAAGCCTCGTATATAGAGAGCAAACACATCTTGTTGCATCAGCATTGGGATAATAAAGAAGTTGCGCAACTTGAAGACTCTCTGACAAATATTGACTACTAACAATCTGGCCTATGCATGTGAATCAACAAAAAAACTAAACTGATCTGCCGCACAGAATAAAGATAGACGTGACTGGTTGTAATTATGTGAGGTATAACACACACACACACACACATAATACACAAAATCTCACAGTCCTCTCATGATAACTGAAAAGAGGTAACATTGTTATGGATGATGGATGGATGGACGGATGGATGGATGGTGCAATTTCAATGAGTGAATGTATTAAAAACAAAGCAAACATTCATTGAAAACACACATACAATGTATTAATAGTGTTCCCCAAAACTCTTCCTCCCTCTCTCTTTTGTCAACTCTATCCAAGTCATTGGAGGTTTGAAATATATTTAAATAAAATCCGCAGATGCTTTTTTTGTTCCATTACATGGATCTCTCTTTAATCTAGCCGCACTCAAAAAGCTATTCAAACATCTTACATAAATTATGCTCTCAGTATTAAAATCAAAGGCCAATGCCACCAGTCCCAGGGCTGTGGGAGAAAACTTTTGATGGACAGAAGGAGAGAAAGACACAAACTTATGATAAGCATATGTCATACATTTTTTTCTGCCTTTCAAAAGATGCCTCACTTCAGGCAGCCTAGATTTGTCTGTTACCAGCTCGACATCAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257641 True 1072 lncRNA 0.36 1 3706539 3707610

Neighbor

gene id symbol gene type direction distance location
CI01000053_03696522_03699590 NA coding downstream 6840 3696458 ~ 3699699 (-)
CI01000053_03665103_03666630 NA coding downstream 38839 3664590 ~ 3667700 (-)
CI01000053_03625343_03653163 NA coding downstream 53205 3624970 ~ 3653334 (-)
CI01000053_03620673_03622682 NA coding downstream 83854 3620240 ~ 3622685 (-)
CI01000053_03592810_03602102 NA coding downstream 104102 3592655 ~ 3602437 (-)
CI01000053_03823296_03825234 NA coding upstream 115484 3823094 ~ 3825328 (-)
CI01000053_04276080_04288879 FAM101A coding upstream 568430 4276040 ~ 4288879 (-)
CI01000053_04415119_04415646 NA coding upstream 707451 4415061 ~ 4415646 (-)
CI01000053_04423076_04430502 RASSF2A coding upstream 715466 4423076 ~ 4430502 (-)
CI01000053_04450920_04470110 SLC23A2 coding upstream 743234 4450844 ~ 4470110 (-)
G227236 NA non-coding downstream 70256 3635717 ~ 3636283 (-)
G227046 NA non-coding downstream 86362 3617608 ~ 3620177 (-)
G227069 NA non-coding downstream 100050 3603898 ~ 3606489 (-)
G227047 NA non-coding downstream 159398 3484863 ~ 3547141 (-)
G227225 NA non-coding downstream 165217 3540756 ~ 3541322 (-)
G227071 NA non-coding upstream 21868 3729478 ~ 3729711 (-)
G227053 NA non-coding upstream 26514 3734124 ~ 3745623 (-)
G227563 NA non-coding upstream 256120 3963730 ~ 3965498 (-)
G227573 NA non-coding upstream 278382 3985992 ~ 3990212 (-)
G227578 NA non-coding upstream 290829 3998439 ~ 4004359 (-)
CI01000053_03551506_03551965 NA other downstream 153568 3550333 ~ 3552847 (-)
G226963 NA other downstream 709271 2996717 ~ 2997268 (-)
G226826 NA other downstream 1139467 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 1469143 2225210 ~ 2226481 (-)
G225812 NA other downstream 2239807 1459595 ~ 1466732 (-)
G227604 NA other upstream 379627 4087237 ~ 4087740 (-)
G228651 NA other upstream 2076873 5784483 ~ 5787690 (-)
G228750 NA other upstream 2223982 5931592 ~ 5932241 (-)

Expression


Co-expression Network