XLOC_009832


Basic Information

Item Value
gene id XLOC_009832
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 19380866 ~ 19381292 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021705
GTAAACAATCATAAATCATCAAACTTTCTTTTTCAAAttcaaattgttttaattttactgtagctcagaataataaaattaagttttcaACAACAAATGCATATTATCAGAATATCAACAAAACGTTCCTTGTTTATCTTTACATTAAGTATAtgaaaacagaaataataaattagttttcAATAAATCATcagcatttataaataaaacaataaaaatggctAACAgtactaaaataaaacaacattttcaacaacaaaaaatatttacagaatatCAACAAAACATTAAAGTGTATTATGAGGTACAAATTTTACAAAACAGGTTTGAATTTATGAAAACAcatcttcatttatttgttcatctgaaTCAACCTCAACATTTTTTAAGAGTACACAATGCATATAAAGACAAATGAATAAATagc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021705 True 427 lncRNA 0.22 1 19380866 19381292

Neighbor

gene id symbol gene type direction distance location
XLOC_009830 rapgef5b coding upstream 229066 19029297 ~ 19151800 (+)
XLOC_009829 si:ch211-254p10.2 coding upstream 357750 19013018 ~ 19023116 (+)
XLOC_009828 slc6a19b coding upstream 382317 18974064 ~ 18998549 (+)
XLOC_009827 rxrbb coding upstream 807991 18534834 ~ 18572875 (+)
XLOC_009826 NA coding upstream 868667 18502566 ~ 18512199 (+)
XLOC_009833 NA coding downstream 127446 19508738 ~ 19513991 (+)
XLOC_009834 sp8b coding downstream 155322 19536614 ~ 19538776 (+)
XLOC_009835 macc1 coding downstream 256092 19637384 ~ 19677375 (+)
XLOC_009836 tmem196b coding downstream 296192 19677484 ~ 19681282 (+)
XLOC_009837 BX005389.4 coding downstream 305421 19686713 ~ 19715210 (+)
XLOC_009821 NA non-coding upstream 1710409 17669300 ~ 17670457 (+)
XLOC_009820 NA non-coding upstream 1713935 17665762 ~ 17666931 (+)
XLOC_009819 NA non-coding upstream 1778966 17600877 ~ 17601900 (+)
XLOC_009818 FP015958.1 non-coding upstream 1809932 17570810 ~ 17570934 (+)
XLOC_009838 BX005389.1 non-coding downstream 323132 19704424 ~ 19704538 (+)
XLOC_009840 CU855688.1 non-coding downstream 423729 19805021 ~ 19809117 (+)
XLOC_009847 NA non-coding downstream 1148833 20530125 ~ 20531772 (+)

Expression


Co-expression Network