Gene
RNA
| Item | Value |
|---|---|
| gene id | G227617 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 4234518 ~ 4236587 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258319 | True | 729 | lncRNA | 0.48 | 2 | 4234518 | 4236587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_03823296_03825234 | NA | coding | downstream | 409190 | 3823094 ~ 3825328 (-) |
| CI01000053_03696522_03699590 | NA | coding | downstream | 534819 | 3696458 ~ 3699699 (-) |
| CI01000053_03665103_03666630 | NA | coding | downstream | 566818 | 3664590 ~ 3667700 (-) |
| CI01000053_03625343_03653163 | NA | coding | downstream | 581184 | 3624970 ~ 3653334 (-) |
| CI01000053_03620673_03622682 | NA | coding | downstream | 611833 | 3620240 ~ 3622685 (-) |
| CI01000053_04276080_04288879 | FAM101A | coding | upstream | 39453 | 4276040 ~ 4288879 (-) |
| CI01000053_04415119_04415646 | NA | coding | upstream | 178474 | 4415061 ~ 4415646 (-) |
| CI01000053_04423076_04430502 | RASSF2A | coding | upstream | 186489 | 4423076 ~ 4430502 (-) |
| CI01000053_04450920_04470110 | SLC23A2 | coding | upstream | 214257 | 4450844 ~ 4470110 (-) |
| CI01000053_04494346_04508379 | KCNIP3A, KCNIP3 | coding | upstream | 257735 | 4494322 ~ 4508640 (-) |
| G227650 | NA | non-coding | downstream | 106038 | 4128222 ~ 4128480 (-) |
| G227605 | NA | non-coding | downstream | 148561 | 4085047 ~ 4085957 (-) |
| G227581 | NA | non-coding | downstream | 195285 | 4006324 ~ 4039233 (-) |
| G227578 | NA | non-coding | downstream | 230159 | 3998439 ~ 4004359 (-) |
| G227573 | NA | non-coding | downstream | 244306 | 3985992 ~ 3990212 (-) |
| G227618 | NA | non-coding | upstream | 8171 | 4244758 ~ 4246698 (-) |
| G227710 | NA | non-coding | upstream | 60106 | 4296693 ~ 4296939 (-) |
| G227715 | NA | non-coding | upstream | 73662 | 4310249 ~ 4310500 (-) |
| G227751 | NA | non-coding | upstream | 174681 | 4411268 ~ 4411587 (-) |
| G227752 | NA | non-coding | upstream | 175802 | 4412389 ~ 4412607 (-) |
| G227604 | NA | other | downstream | 146778 | 4087237 ~ 4087740 (-) |
| CI01000053_03551506_03551965 | NA | other | downstream | 681547 | 3550333 ~ 3552847 (-) |
| G226963 | NA | other | downstream | 1237250 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 1667446 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 1997122 | 2225210 ~ 2226481 (-) |
| G228651 | NA | other | upstream | 1547896 | 5784483 ~ 5787690 (-) |
| G228750 | NA | other | upstream | 1695005 | 5931592 ~ 5932241 (-) |
