G227974


Basic Information

Item Value
gene id G227974
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5114577 ~ 5114803 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU258709
CTGATGTGCAATCCAACTGAAACAAAACAAGTTTAACATTATATGTCCTCTAAGTAAAAAAAATAAATAAAAATCTAAAAAAAAAGACAAATATGCGATTAGCAAGGACTAAAATCCAGTGTCTAACATTCACACGGTTCTGAGTTTCAGTTCAATGGCCTAAGTAGAGTAACGTTACTGGACTGAAACCCTTTACGGTTTAGTCCGAATATGTCAGTGACATCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258709 True 227 lncRNA 0.34 1 5114577 5114803

Neighbor

gene id symbol gene type direction distance location
CI01000053_04887190_04967327 GFRA2A coding upstream 147250 4887190 ~ 4967327 (+)
CI01000053_04725274_04746721 NA coding upstream 367209 4724511 ~ 4747368 (+)
CI01000053_04714218_04716351 KAZALD3, KAZALD1 coding upstream 398043 4713891 ~ 4716534 (+)
CI01000053_04668583_04699797 KIAA1671 coding upstream 412899 4668583 ~ 4701678 (+)
CI01000053_04399676_04409215 CCDC92 coding upstream 705362 4399676 ~ 4409215 (+)
CI01000053_05187818_05191994 NA coding downstream 72890 5187693 ~ 5192234 (+)
CI01000053_05214150_05219071 NA coding downstream 99347 5214150 ~ 5220330 (+)
CI01000053_05235005_05242054 PRKAB1B, PRKAB1 coding downstream 118904 5233707 ~ 5242337 (+)
CI01000053_05253537_05256485 PLA2G1B coding downstream 138690 5253493 ~ 5256998 (+)
CI01000053_05267143_05269915 NA coding downstream 152296 5267099 ~ 5270434 (+)
G227973 NA non-coding upstream 1483 5112853 ~ 5113094 (+)
G227935 NA non-coding upstream 55953 5058329 ~ 5058624 (+)
G227932 NA non-coding upstream 60453 5053910 ~ 5054124 (+)
G227924 NA non-coding upstream 76733 5037630 ~ 5037844 (+)
G227917 NA non-coding upstream 99908 5014460 ~ 5014669 (+)
G227979 NA non-coding downstream 11158 5125961 ~ 5126407 (+)
G228243 NA non-coding downstream 41619 5156422 ~ 5156781 (+)
G228263 NA non-coding downstream 83553 5198356 ~ 5198568 (+)
G228274 NA non-coding downstream 146228 5261031 ~ 5261370 (+)
G228311 NA non-coding downstream 297156 5411959 ~ 5412340 (+)
G227317 NA other upstream 698984 4414951 ~ 4415593 (+)
G226399 NA other upstream 1417048 3620798 ~ 3697529 (+)
G226347 NA other upstream 1839666 3272374 ~ 3274911 (+)
G226292 NA other upstream 2067794 3036602 ~ 3046783 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 2519110 2592558 ~ 2595467 (+)
G228257 NA other downstream 260750 5375553 ~ 5378449 (+)
CI01000053_05471449_05512831 LRRC75B other downstream 394441 5471449 ~ 5513074 (+)
CI01000053_06725452_06758944 NA other downstream 1608396 6725452 ~ 6758944 (+)

Expression


Co-expression Network