G227979


Basic Information

Item Value
gene id G227979
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5125961 ~ 5126407 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU258714
CTTTAGTGTATATGCAGGTCAAAGAGGCTGGTTTAGGTTTTTTTGGCATCTCCATGTGGTCCTGTTCAGTATCGCAACTTGACTTGTCTAAAATGTAAACAAGCTCTTTGCTGTTGCACATACTATACACTGTGAATTCTGAAACGTTTTTTTTTTTTTGCTGTGTTTTTTTTTTTTTTTTAAATGGGTGCTTTGGTGTACATAAATGTATGAATTATATGAAATCATATCATTTGGTTATTTGGTTTCCTTTTTTGGAAAGACATCTAGATTTACCTTGAAAAAAGCTGAAAAATACAGTTTTGTGAAAATCACACTTGGTTTAGTTGCTGGATATAGGCAATGATGGCAAAATGGACACGTTAAAGAAGATAAATGGTGTATGCATAATTTCACAATAAGTGTGCGATTAATCAAAAAAGAAATTAATCTATTGACAGCCCTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258714 True 447 lncRNA 0.32 1 5125961 5126407

Neighbor

gene id symbol gene type direction distance location
CI01000053_04887190_04967327 GFRA2A coding upstream 158634 4887190 ~ 4967327 (+)
CI01000053_04725274_04746721 NA coding upstream 378593 4724511 ~ 4747368 (+)
CI01000053_04714218_04716351 KAZALD3, KAZALD1 coding upstream 409427 4713891 ~ 4716534 (+)
CI01000053_04668583_04699797 KIAA1671 coding upstream 424283 4668583 ~ 4701678 (+)
CI01000053_04399676_04409215 CCDC92 coding upstream 716746 4399676 ~ 4409215 (+)
CI01000053_05187818_05191994 NA coding downstream 61286 5187693 ~ 5192234 (+)
CI01000053_05214150_05219071 NA coding downstream 87743 5214150 ~ 5220330 (+)
CI01000053_05235005_05242054 PRKAB1B, PRKAB1 coding downstream 107300 5233707 ~ 5242337 (+)
CI01000053_05253537_05256485 PLA2G1B coding downstream 127086 5253493 ~ 5256998 (+)
CI01000053_05267143_05269915 NA coding downstream 140692 5267099 ~ 5270434 (+)
G227974 NA non-coding upstream 11158 5114577 ~ 5114803 (+)
G227973 NA non-coding upstream 12867 5112853 ~ 5113094 (+)
G227935 NA non-coding upstream 67337 5058329 ~ 5058624 (+)
G227932 NA non-coding upstream 71837 5053910 ~ 5054124 (+)
G227924 NA non-coding upstream 88117 5037630 ~ 5037844 (+)
G228243 NA non-coding downstream 30015 5156422 ~ 5156781 (+)
G228263 NA non-coding downstream 71949 5198356 ~ 5198568 (+)
G228274 NA non-coding downstream 134624 5261031 ~ 5261370 (+)
G228311 NA non-coding downstream 285552 5411959 ~ 5412340 (+)
G228309 NA non-coding downstream 286162 5412569 ~ 5413283 (+)
G227317 NA other upstream 710368 4414951 ~ 4415593 (+)
G226399 NA other upstream 1428432 3620798 ~ 3697529 (+)
G226347 NA other upstream 1851050 3272374 ~ 3274911 (+)
G226292 NA other upstream 2079178 3036602 ~ 3046783 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L other upstream 2530494 2592558 ~ 2595467 (+)
G228257 NA other downstream 249146 5375553 ~ 5378449 (+)
CI01000053_05471449_05512831 LRRC75B other downstream 382837 5471449 ~ 5513074 (+)
CI01000053_06725452_06758944 NA other downstream 1596792 6725452 ~ 6758944 (+)

Expression


Co-expression Network