G228311


Basic Information

Item Value
gene id G228311
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5411959 ~ 5412340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU259072
CGTGACTGCAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCGCAAAAACAAAACAAAAATAATGACTTTACTCAACAATCTCTTCTCTTCCCTGTCATTACCCTTACGCAGATGACACAGTAAGCACAGCGAAGGCTTCCGTATTTACGTCCGAATGCCGGCTCAGTATTGGCCAAAGCTGATCACGTGAGCAGCACAACGCACACGTGATGCTGACGCAAGAGCCCACCAATAATGAGTCGGCATTCTGATGTAGAACCTGGAAGCGCTGGACGTAAACGACGTATGAGAATGACACAGAAGAGAATAGATTGTTAAATAATTATTTTTGTTTTGTTTTTGTGCAAAAAAGTATTGTTGTCGCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259072 True 382 lncRNA 0.42 1 5411959 5412340

Neighbor

gene id symbol gene type direction distance location
CI01000053_05362044_05364177 PBLD2, PBLD coding upstream 46262 5360922 ~ 5365697 (+)
CI01000053_05338500_05348218 HNF1A coding upstream 63741 5338500 ~ 5348218 (+)
CI01000053_05332254_05334016 NA coding upstream 77639 5332254 ~ 5334320 (+)
CI01000053_05320241_05329853 HPS4 coding upstream 82095 5320241 ~ 5329864 (+)
CI01000053_05314523_05315601 NA coding upstream 95369 5314523 ~ 5316590 (+)
CI01000053_05435608_05443587 GGT5A coding downstream 23139 5435479 ~ 5445226 (+)
CI01000053_05471449_05512831 LRRC75B coding downstream 59109 5471449 ~ 5513074 (+)
CI01000053_05526931_05550454 NA coding downstream 114289 5526629 ~ 5550472 (+)
CI01000053_05563771_05573792 RNF34, RNF34A coding downstream 151431 5563771 ~ 5573965 (+)
CI01000053_05589379_05590208 NA coding downstream 176552 5588892 ~ 5591102 (+)
G228274 NA non-coding upstream 150589 5261031 ~ 5261370 (+)
G228263 NA non-coding upstream 213391 5198356 ~ 5198568 (+)
G228243 NA non-coding upstream 255178 5156422 ~ 5156781 (+)
G227979 NA non-coding upstream 285552 5125961 ~ 5126407 (+)
G227974 NA non-coding upstream 297156 5114577 ~ 5114803 (+)
G228309 NA non-coding downstream 229 5412569 ~ 5413283 (+)
G228317 NA non-coding downstream 18017 5430357 ~ 5430563 (+)
G228334 NA non-coding downstream 111240 5523580 ~ 5524211 (+)
G228257 NA other upstream 33510 5375553 ~ 5378449 (+)
G227317 NA other upstream 996366 4414951 ~ 4415593 (+)
G226399 NA other upstream 1714430 3620798 ~ 3697529 (+)
G226347 NA other upstream 2137048 3272374 ~ 3274911 (+)
G226292 NA other upstream 2365176 3036602 ~ 3046783 (+)
CI01000053_06725452_06758944 NA other downstream 1310859 6725452 ~ 6758944 (+)

Expression


Co-expression Network