Gene
RNA
| Item | Value |
|---|---|
| gene id | G228584 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 5537605 ~ 5537824 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU259406 | True | 220 | lncRNA | 0.30 | 1 | 5537605 | 5537824 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_05521820_05524159 | GPX8 | coding | downstream | 13446 | 5521615 ~ 5524159 (-) |
| CI01000053_05452721_05459354 | GGT1A, GGT1B, GGT1 | coding | downstream | 78251 | 5452264 ~ 5459354 (-) |
| CI01000053_05416830_05423957 | ASPHD2 | coding | downstream | 112908 | 5415744 ~ 5424697 (-) |
| CI01000053_05390157_05393405 | NA | coding | downstream | 144200 | 5390023 ~ 5393405 (-) |
| CI01000053_05378213_05386176 | NA | coding | downstream | 150992 | 5377310 ~ 5386613 (-) |
| CI01000053_05552919_05561938 | ANAPC5 | coding | upstream | 14411 | 5552169 ~ 5562961 (-) |
| CI01000053_05577140_05583728 | KDM2B, KDM2BA | coding | upstream | 39222 | 5577046 ~ 5584765 (-) |
| CI01000053_05621226_05622308 | APJA, APLNRA, APLNR | coding | upstream | 82585 | 5620409 ~ 5622498 (-) |
| CI01000053_05675892_05686424 | NA | coding | upstream | 137155 | 5674979 ~ 5686424 (-) |
| CI01000053_05690377_05690558 | NA | coding | upstream | 152553 | 5690377 ~ 5690777 (-) |
| G228583 | NA | non-coding | downstream | 4083 | 5533210 ~ 5533522 (-) |
| G228576 | NA | non-coding | downstream | 19076 | 5518303 ~ 5518529 (-) |
| G228563 | NA | non-coding | downstream | 34372 | 5502955 ~ 5503233 (-) |
| G228559 | NA | non-coding | downstream | 42182 | 5495213 ~ 5495423 (-) |
| G228558 | NA | non-coding | downstream | 43966 | 5493392 ~ 5493639 (-) |
| G228585 | NA | non-coding | upstream | 4601 | 5542425 ~ 5542656 (-) |
| G228586 | NA | non-coding | upstream | 8321 | 5546145 ~ 5546379 (-) |
| G228589 | NA | non-coding | upstream | 64987 | 5602811 ~ 5603113 (-) |
| G228592 | NA | non-coding | upstream | 66925 | 5604749 ~ 5605034 (-) |
| G227604 | NA | other | downstream | 1449865 | 4087237 ~ 4087740 (-) |
| CI01000053_03551506_03551965 | NA | other | downstream | 1984634 | 3550333 ~ 3552847 (-) |
| G226963 | NA | other | downstream | 2540337 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 2970533 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 3300209 | 2225210 ~ 2226481 (-) |
| G228651 | NA | other | upstream | 246659 | 5784483 ~ 5787690 (-) |
| G228750 | NA | other | upstream | 393768 | 5931592 ~ 5932241 (-) |
