G228620


Basic Information

Item Value
gene id G228620
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 5663499 ~ 5663732 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU259442
CTCCTCAAGGGCCGGTCCAAGTCTCTGTCCTAGAATCCATCTGCCTGAGAAGCCTTCCATCAGCTCCAAGAAGCTTTCCCCACCTCTCCGATCCTGGTCCATCCGAACCCGGAACTCCCTTTCATCGTGGAGGTGAACGCCTCATCCGACGGGGTCGGAGCGGTGTTGTCCCAGCGGCAGGGTGAACCACCACGACTCCATCCATGTGCCTTTTTCTCAAAGAAGCTATACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259442 True 234 lncRNA 0.58 1 5663499 5663732

Neighbor

gene id symbol gene type direction distance location
CI01000053_05621226_05622308 APJA, APLNRA, APLNR coding downstream 41001 5620409 ~ 5622498 (-)
CI01000053_05577140_05583728 KDM2B, KDM2BA coding downstream 78734 5577046 ~ 5584765 (-)
CI01000053_05552919_05561938 ANAPC5 coding downstream 100538 5552169 ~ 5562961 (-)
CI01000053_05521820_05524159 GPX8 coding downstream 139340 5521615 ~ 5524159 (-)
CI01000053_05452721_05459354 GGT1A, GGT1B, GGT1 coding downstream 204145 5452264 ~ 5459354 (-)
CI01000053_05675892_05686424 NA coding upstream 11247 5674979 ~ 5686424 (-)
CI01000053_05690377_05690558 NA coding upstream 26645 5690377 ~ 5690777 (-)
CI01000053_05692640_05695728 MYL7, MYLC2A, MYL7.L coding upstream 28903 5692635 ~ 5695728 (-)
CI01000053_05732296_05750809 NPC1L1 coding upstream 67646 5731378 ~ 5750809 (-)
CI01000053_06038638_06043939 FAHD2B, FAHD2A coding upstream 374604 6038336 ~ 6043939 (-)
G228619 NA non-coding downstream 337 5662954 ~ 5663162 (-)
G228610 NA non-coding downstream 14249 5649033 ~ 5649250 (-)
G228608 NA non-coding downstream 19637 5643605 ~ 5643862 (-)
G228595 NA non-coding downstream 53794 5609297 ~ 5609705 (-)
G228593 NA non-coding downstream 58107 5605151 ~ 5605392 (-)
G228622 NA non-coding upstream 2671 5666403 ~ 5666761 (-)
G228639 NA non-coding upstream 93522 5757254 ~ 5757596 (-)
G228641 NA non-coding upstream 98567 5762299 ~ 5762553 (-)
G228651 NA non-coding upstream 120751 5784483 ~ 5787690 (-)
G228666 NA non-coding upstream 135337 5799069 ~ 5799843 (-)
G227604 NA other downstream 1575759 4087237 ~ 4087740 (-)
CI01000053_03551506_03551965 NA other downstream 2110528 3550333 ~ 3552847 (-)
G226963 NA other downstream 2666231 2996717 ~ 2997268 (-)
G226826 NA other downstream 3096427 2565892 ~ 2567072 (-)
CI01000053_02225226_02226481 YPELD, YPEL2B, YPEL1, YPELC, YPEL2 other downstream 3426103 2225210 ~ 2226481 (-)
G228750 NA other upstream 267860 5931592 ~ 5932241 (-)

Expression


Co-expression Network