Gene
RNA
| Item | Value |
|---|---|
| gene id | G228641 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000053 |
| NCBI id | null |
| chromosome length | 7014373 |
| location | 5762299 ~ 5762553 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU259463 | True | 255 | lncRNA | 0.39 | 1 | 5762299 | 5762553 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000053_05732296_05750809 | NPC1L1 | coding | downstream | 11490 | 5731378 ~ 5750809 (-) |
| CI01000053_05692640_05695728 | MYL7, MYLC2A, MYL7.L | coding | downstream | 66571 | 5692635 ~ 5695728 (-) |
| CI01000053_05690377_05690558 | NA | coding | downstream | 71522 | 5690377 ~ 5690777 (-) |
| CI01000053_05675892_05686424 | NA | coding | downstream | 75875 | 5674979 ~ 5686424 (-) |
| CI01000053_05621226_05622308 | APJA, APLNRA, APLNR | coding | downstream | 139801 | 5620409 ~ 5622498 (-) |
| CI01000053_06038638_06043939 | FAHD2B, FAHD2A | coding | upstream | 275783 | 6038336 ~ 6043939 (-) |
| CI01000053_06060129_06071679 | RNF10 | coding | upstream | 297056 | 6059609 ~ 6071679 (-) |
| CI01000053_06162569_06179766 | GOLGA1 | coding | upstream | 399526 | 6162079 ~ 6180102 (-) |
| CI01000053_06287804_06296687 | NA | coding | upstream | 524661 | 6287214 ~ 6296687 (-) |
| CI01000053_06308157_06310323 | NA | coding | upstream | 545049 | 6307318 ~ 6310466 (-) |
| G228639 | NA | non-coding | downstream | 4703 | 5757254 ~ 5757596 (-) |
| G228622 | NA | non-coding | downstream | 95538 | 5666403 ~ 5666761 (-) |
| G228620 | NA | non-coding | downstream | 98567 | 5663499 ~ 5663732 (-) |
| G228619 | NA | non-coding | downstream | 99137 | 5662954 ~ 5663162 (-) |
| G228610 | NA | non-coding | downstream | 113049 | 5649033 ~ 5649250 (-) |
| G228651 | NA | non-coding | upstream | 21930 | 5784483 ~ 5787690 (-) |
| G228666 | NA | non-coding | upstream | 36516 | 5799069 ~ 5799843 (-) |
| G228668 | NA | non-coding | upstream | 40437 | 5802990 ~ 5803250 (-) |
| G228689 | NA | non-coding | upstream | 59942 | 5822495 ~ 5822814 (-) |
| G228691 | NA | non-coding | upstream | 60933 | 5823486 ~ 5823803 (-) |
| G227604 | NA | other | downstream | 1674559 | 4087237 ~ 4087740 (-) |
| CI01000053_03551506_03551965 | NA | other | downstream | 2209328 | 3550333 ~ 3552847 (-) |
| G226963 | NA | other | downstream | 2765031 | 2996717 ~ 2997268 (-) |
| G226826 | NA | other | downstream | 3195227 | 2565892 ~ 2567072 (-) |
| CI01000053_02225226_02226481 | YPELD, YPEL2B, YPEL1, YPELC, YPEL2 | other | downstream | 3524903 | 2225210 ~ 2226481 (-) |
| G228750 | NA | other | upstream | 169039 | 5931592 ~ 5932241 (-) |
