XLOC_009845 (fkbp14)


Basic Information

Item Value
gene id XLOC_009845
gene name fkbp14
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 20294976 ~ 20305104 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019654
CAGACATCACTACTTTGGGAAAGATTTAAGACCCCCTGAAGAAATTTCGCTTGCCACGTAGCTGTGGCAGGGCAACTTGTAGTTTGGGAAGTTTTTCAGAACTTTTTTTGTACATGAAACATTAGTCGAGTAGTTAGAAAGTGTCAAACTGTTCTTCATATTAAGATGATTCCAGAGTTGTGGACATGCATcttttctgcatttttcttttACGTGCATGGAGCAAAACTTCCGGAGCCTGAGGTGAAAATAGAAGTTTTATACAAACCTTTCCTTTGTCATCGTAAATCCAAATACGGGGATATTCTTCTGGTTCACTACGATGGCTTTCTGGAGAGTAACGGCACAATGTTTCATTCCAGCCGCCATCAAGGAGACAAAAACCCTGTCTGGTTCACGTTGGGGATCCGAGAGGTGATCAAGGGCTGGGATAAGGGTCTTCAAAACATGTGTGCAGGAGAGAAGAGGAAACTGACCATCCCTCCAGCTCTTGCATATGGAAAAGAGGGCAAAGGTAAAATCCCTCCAGAAAGCACTCTGATATTTGATATAGAGATCATAGAGATCCGAAACGGACCCAGGTCACATGAGTCCTTCCAGGAAATGGACCTCAATGATGACTGGAAACTTTCCAAAGCTGAGGTCAAAGAATACCTGCGCAAAGAGTTTGAAAAGCATGGATATGCTGCCAATGACACCCATCATGAAGTGATGGTTGAGGACATCTTTCAGAAAGAAGATGAAGACAAAGATGGATTTATATCATCTCGGGAGTTCACTTATCAACATGATGAACTGTAATTACACACTCCTGCAGCAAAAACATTACAACATTTCCCTTCTAATAGATTCCAGTATTTGCCTACAGAGATTTGTCATGCCACAGAAGATATACAAAAGTGTGTTTGTATCTACAGTACAAGCCAGGTGTGTAAtttatgttagtttttttttaatctacacTCAGGTGATATAGAAGGTACATttgagcagtttttaatatttgaaCGTTCGAATTTAAATTTTAAGCAAAGACAATGTTATCCCATAAGTGCCTGACTCaatttaaagggccagttcactacaaaaataaatttgactccctttttactcaccctcaaatgtttccaaacatttatgagtttctattttctgttcaacacataaaaatgtgaaaattgtCATCGTTACCTGCCtcccatagtagaaaaaacaaatactatggaagtcaatagtttcaAACATTTCTCAGAATGATTTCTTTCGTGTTCATGAGAATAAAACAGAcgttaagtgtgagtaaatgaggacagatttttcaattttgggtgaactattgctttaactttatttaacttttaattataGCGGATGTTTATATGACAGGGTTTTTAACTAAAAACAGAACCTTTAATGCATTTCTGTCACTTGTTTATATATGTTTTGTAGTCCTGAAAATGCAACTTTAGAAAAAGGCCTAaccctaacaaaaaaaaaaaaaaaaaaacaacgtaaATTTCTAAAAACAGTGACATCATGCACATGCATATTACATCCTGTCTATAGATATATTTAAAGATGACCTAGGGcaggcgatttggcctaaaatctcaATTTTAACTCTATTACGATTAaggaacatttattttatttattcttttgcccTCTCCATGCCGCCCACACTCATCAATGCGACCAAGTGGACCAATGACAGAGCTTACGCTATGTGTTGATGTGACGtgtggttacattttttgagaggtcggCGTTAATCATGGCGAAGGGTATGCGACTGCGTGAAGGCTG
>TCONS_00019655
TCCAAAGTGCAGCTGCCAGCTCAAACAAGTCAAATATGCAAGCCTCTAACCTTCAGTTCACATCTTACTGTTGGCAGCCGCCATCAAGGAGACAAAAACCCTGTCTGGTTCACGTTGGGGATCCGAGAGGTGATCAAGGGCTGGGATAAGGGTCTTCAAAACATGTGTGCAGGAGAGAAGAGGAAACTGACCATCCCTCCAGCTCTTGCATATGGAAAAGAGGGCAAAGGTAAAATCCCTCCAGAAAGCACTCTGATATTTGATATAGAGATCATAGAGATCCGAAACGGACCCAGGTCACATGAGTCCTTCCAGGAAATGGACCTCAATGATGACTGGAAACTTTCCAAAGCTGAGGTCAAAGAATACCTGCGCAAAGAGTTTGAAAAGCATGGATATGCTGCCAATGACACCCATCATGAAGTGATGGTTGAGGACATCTTTCAGAAAGAAGATGAAGACAAAGATGGATTTATATCATCTCGGGAGTTCACTTATCAACATGATGAACTGTAATTACACACTCCTGCAGCAAAAACATTACAACATTTCCCTTCTAATAGATTCCAGTATTTGCCTACAGAGATTTGTCATGCCACAGAAGATATACAAAAGTGTGTTTGTATCTACAGTACAAGCCAGGTGTGTAAtttatgttagtttttttttaatctacacTCAGGTGATATAGA

Function

symbol description
fkbp14 Predicted to enable calcium ion binding activity and peptidyl-prolyl cis-trans isomerase activity. Is expressed in notochord. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome kyphoscoliotic type 2. Orthologous to human FKBP14 (FKBP prolyl isomerase 14).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0016853 isomerase activity molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
ko03110 Chaperones and folding catalysts

ZFIN:

id description
ZDB-GENE-040801-210 Predicted to enable calcium ion binding activity and peptidyl-prolyl cis-trans isomerase activity. Is expressed in notochord. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome kyphoscoliotic type 2. Orthologous to human FKBP14 (FKBP prolyl isomerase 14).

Ensembl:

ensembl_id ENSDARG00000040695

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019654 False 1806 mRNA 0.38 4 20294976 20305104
TCONS_00019655 True 692 processed_transcript 0.42 3 20296823 20304275

Neighbor

gene id symbol gene type direction distance location
XLOC_009844 colq coding upstream 55991 20198064 ~ 20238985 (+)
XLOC_009843 hacl1 coding upstream 100591 20167811 ~ 20194385 (+)
XLOC_009842 c16h2orf66 coding upstream 130522 20161805 ~ 20164454 (+)
XLOC_009841 ankrd28b coding upstream 140117 20055878 ~ 20154859 (+)
XLOC_009840 CU855688.1 coding upstream 485859 19805021 ~ 19809117 (+)
XLOC_009846 cpvl coding downstream 191587 20496691 ~ 20515806 (+)
XLOC_009847 NA coding downstream 225021 20530125 ~ 20531772 (+)
XLOC_009848 NA coding downstream 379836 20684940 ~ 20695517 (+)
XLOC_009849 jazf1b coding downstream 433636 20738740 ~ 20800498 (+)
XLOC_009850 hibadhb coding downstream 565911 20871015 ~ 20889516 (+)
XLOC_009837 BX005389.4 non-coding upstream 579766 19686713 ~ 19715210 (+)
XLOC_009838 BX005389.1 non-coding upstream 590438 19704424 ~ 19704538 (+)
XLOC_009833 NA non-coding upstream 780985 19508738 ~ 19513991 (+)
XLOC_009832 NA non-coding upstream 913684 19380866 ~ 19381292 (+)
XLOC_009854 mir196d non-coding downstream 608309 20913413 ~ 20913484 (+)
XLOC_009859 NA non-coding downstream 835944 21141048 ~ 21142516 (+)
XLOC_009862 NA non-coding downstream 1329283 21634387 ~ 21634836 (+)

Expression


Co-expression Network