CI01000054_00195914_00197098


Basic Information

Item Value
gene id CI01000054_00195914_00197098
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 195226 ~ 197219 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00195914_00197098.mRNA
ACACAAAAGTAGAGCAATCCGTAAAGGGAAACCGTGTCTATTGTTTTGCCCATGACAGACCAACACACTATTAAACCACCATTTTCCCTTCACTCAACAATATGTGAAACGTAACGAAAGCATGCTGACATTCTCCCTCTCTCTTTCTGTCCTGCTTTCAGTCTTCCTGAGAGAGATGTTGAGAAACGCACAGGAAGACAATCAGAGCGTGCTGCTACCTGAAAAGGAATTGATGCCGAGAGCGATCCCAGAAGCCGCCACTGCGCAGCGTGAGAGCGAGCCAAAAAAACACGCACGCCGATCTGTGATTCAGCTCGCAGATGTGCTGACAACTGCAGTCACGTCTGACGTTGTAATTGCAACTGGCTGCGAGCTGTTTACGGCTAGAGAATCACACATATGGACTTGCCCCTTTCATTTTAGGGCTGCTGCACATTCTCCTGATTACGTCTCCTCCTCTCTCGCGCCCGTTCCATCACTGACACCACCCTTGATGGACGGCTGTGCTGCGCGGGAGCCGTCGCCGAGCGACGCACGTAAACAATGGGAATGTTTGCACTTTGTTTATTCGTATCACGCTGAGAATCGTCGTGCCAAATCAGCTAGTGTTTTCTCTAAACAATTTGGGTGTGCTGTCATTTCGTGATACCTGGAAAAGCTGTCGGAGGATTCACTCAAGATTACCTTACAATACTGCTGCCAAATAGAGTGCAAGCAAACCGTACAAAGGCAGCGTTTATTGCCCTTAATGAAGCATAACAGCCACCGTCAGCACTCATATGCTAACATTATGCCACACTCGCCTCAAATGCCACCAGAGCTGAGTAATATGACAAATGACACGACCGTGCATAAACATTTCTACAGTCCTTTTTTAGCAAAGCTCAGAACCGGAATGATGGTGCAAAGCTTGTCTCAATTCTTTGAAGGGAATGTTCCCACACAAAAATAATAATTCTGTCAATTATTGACCCAAACCTGTAGGAGTTTCTTCTGCCAAACACACAAAAAAGGTTTTTTTTGTCCATACATTCAAAGTCAATGGGGTCCAAAGTTGTTTTATCATCACAGTTTTCGTTTGTGTATCACGGAACAAAGAAAATCATACCAGTTTGGAAATGATGACAGAATTGTTTATATAAAACAAAACTGTTTCACTGCTAATTATTATTATTTTGAGACATAATATTAAAATATGACACCAAACTACTAAGTATTTCTTTTCATTTTTTCTTTATTATAGCAGTTGCTGACATTTTTGGTTTTACGTCCCCCCAAAAAAACAACAAATTTAAATTCAAAAATAAAAAGGTGTTGTTGACTAAATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00195914_00197098.mRNA True 1334 mRNA 0.42 4 195226 197219

Neighbor

gene id symbol gene type direction distance location
CI01000054_00188121_00191695 NA coding downstream 3268 187797 ~ 191958 (-)
CI01000054_00147623_00148143 NA coding downstream 46971 147591 ~ 148255 (-)
CI01000054_00094396_00130159 NA coding downstream 65041 94260 ~ 130185 (-)
CI01000054_00888859_00895223 LRRC14B coding upstream 691229 888448 ~ 895223 (-)
CI01000054_00898039_00902381 NA coding upstream 700323 897542 ~ 902381 (-)
CI01000054_00924015_00926256 GATAD1 coding upstream 726515 923734 ~ 926256 (-)
CI01000054_00929337_00955240 ANKIB1A coding upstream 731913 929132 ~ 955674 (-)
CI01000054_00965111_00970121 LYPLA2, LYPA2 coding upstream 767423 964642 ~ 970121 (-)
G229995 NA non-coding downstream 91656 103288 ~ 103570 (-)
G229994 NA non-coding downstream 97204 97733 ~ 98022 (-)
G229599 NA non-coding downstream 175632 19281 ~ 19594 (-)
G230063 NA non-coding upstream 58104 255323 ~ 255615 (-)
G230073 NA non-coding upstream 100718 297937 ~ 298168 (-)
G230085 NA non-coding upstream 193308 390527 ~ 390743 (-)
G230092 NA non-coding upstream 209175 406394 ~ 552909 (-)
G230108 NA non-coding upstream 257273 454492 ~ 657177 (-)
G230178 NA other upstream 988314 1185533 ~ 1230135 (-)
G230923 NA other upstream 2640018 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 2656922 2857402 ~ 2860573 (-)
G230908 NA other upstream 2860429 3057648 ~ 3063343 (-)
G231645 NA other upstream 3784628 3981847 ~ 3982823 (-)

Expression


Co-expression Network