CI01000054_00239444_00241646


Basic Information

Item Value
gene id CI01000054_00239444_00241646
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 239444 ~ 241843 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00239444_00241646.mRNA
ATGTATTTAAAGGTTCACGTCATGCATGTGTTCAAGAAGAGACATTTATTGAAAGATCAAAATATTTATGTCAGGCCGGTGCGGGCGACCCAGTTTGAAGCTGGTGGAGTTGTCGCTGACACAGTGGTATCTTACAAAGCCTATAAATCACAGGAAGAGACGGCGGGGCTCGGGGGTCTTCTGCGCCAACTGTCTGACCACCAAGACCTCGCTGTGGAGGAAGAATGCCAACGGCGGCTACGTGTGCAACGCGTGTGGCCTCTATCAGAAGCTGCACTCGGTAAGGGGGGAACTAAGAAAACATCAGGGCAAGGGACGGCGAGAATGCCTCGCCAGCCCACCCACAAATCGCAGAAACAGAGTTCAAATGAATGGAGAGCGCTCTTTGGCCTCGGGCTATCAAGACCAGCGCCTGGGTGGCACAGGCTCGGATACAGGGAACCGACTGAATCAGTGTGGTCGGCTGGGGTAAAGCAGTCAGTCACCGCAGCGCCCGGACCACAAGAGGCTCTTTCAGGGGCCATGCCACCTGGTGGCTTGAGTCGTGCTAACTTGACCCAGCACAGGCATTCACATCTGGCTGTCTGTCCGCACCGCCTCATCACAGAGCCTGCAATCAATGGGCGCTTCACAGCCAGGCCTGTGAAATACTGTACGCTCTATTTACTGCCCCACATTAAACACTGTCTGGAGTAAATAAGTTTCCTCACGCCGTAAGTTTTTCTAACTTTGACATTTATGTTGGAGTTCCATCATGCATTGATGCAGAAGCTGTACTGATGCTCGCATCAGTCTTTGCTCTGGGTTCCTGGGACAGAAAAAGTGGGGTGGCCATGACTTTAAGGGAAACAGGAACCATTCTTGACAGCTTTACAGCTTAGATCACATTGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00239444_00241646.mRNA True 893 mRNA 0.52 3 239444 241843

Neighbor

gene id symbol gene type direction distance location
CI01000054_00157332_00178926 NA coding upstream 59299 157332 ~ 180145 (+)
CI01000054_00131576_00136719 NA coding upstream 102598 130829 ~ 136846 (+)
CI01000054_00248538_00251489 NA coding downstream 6150 247993 ~ 252114 (+)
CI01000054_00390853_00579795 CSMD3 coding downstream 149010 390853 ~ 579795 (+)
CI01000054_00612177_00613764 NA coding downstream 368492 610335 ~ 614879 (+)
CI01000054_00637123_00665809 NA coding downstream 395030 636873 ~ 666129 (+)
CI01000054_00666830_00754317 CSMD3 coding downstream 424549 666392 ~ 754317 (+)
G229638 NA non-coding upstream 52416 184874 ~ 187028 (+)
G229637 NA non-coding upstream 141422 97764 ~ 98022 (+)
G229630 NA non-coding upstream 151062 88152 ~ 88382 (+)
G229670 NA non-coding downstream 61012 302855 ~ 348887 (+)
G229682 NA non-coding downstream 129787 371630 ~ 371932 (+)
G229717 NA non-coding downstream 618757 860600 ~ 861220 (+)
CI01000054_00916253_00919736 NA non-coding downstream 674273 916116 ~ 919986 (+)
G229736 NA non-coding downstream 676146 917989 ~ 918274 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 984492 1226335 ~ 1230329 (+)
G229760 NA other downstream 1024507 1266350 ~ 1273750 (+)
G229936 NA other downstream 1155237 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 1336592 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 1409117 1650242 ~ 1666115 (+)

Expression


Co-expression Network