CI01000054_00248538_00251489


Basic Information

Item Value
gene id CI01000054_00248538_00251489
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 247993 ~ 252114 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00248538_00251489.mRNA
CTATAAAAAAAGAACTAGAACAAATGCCCACTACCATCTGTTCTGTGCAGTGAGGGCCTGACATGGTCCAGCAGTAGAGGGCACTCTTTCTTTTTGTCTGGCTTTCATCCCCATCCTCTTCAGATAGACAGCCGGCCTGACATGTTCCAAAGAGCGAGAGCTTGCATTTTAACACCATCCATCACAGGGCATTAACTGAAGTTAAGCAACACAGTAAGGTTTGTTTTAGATGTAACTCCGGTCCCCAGTGGTCAAACATTCTTGAAAATATGCATCTCCTGTTTCTTCCCCTAGAACATCTGGTGCAGAGCCAAAGGCTAGATTGAGGCGGCTTTGTTGGAGCTACATTTTTGCATAAATTATTTTTCCAGCTTTTAAGGGGAAAATGAGTACCAGAGAAATATGTTCCTTCTGTCATACTGAAACACTCAGCCATCCCAAGCCTCCCCTTCTTTGAAAGGGATTGTTTTCCTTAGCCTAGGTACATGACTGTGGATCTGGGTGCTACAAATGCAAGTGGCGACCATACATGATTGATTCCCGCGATGTGCCTCTACCTCAAAGTCAACAAGCAGTCAGAAGGTGCTGGTAGAGGGGGGAGACGTGGTTCTTCTGCCAATTATCTCTGGCTCTGGACCCCCAGACCGCTGAACATTATCAAGCAAAACAACGGCGAGCAGATCATCCGTCGACGGACACGCAAGCGCCTGAACCCTGACCCCGTCCCGCCTGAGCAGGTGGGGTCCAAGCAGCAGCGCGTCAACAGCGAGGAACGTCTCAACGGCAGCCCCTTAGAGAGGAGGACTGAGGAAGCAGGATCCGATGGGTCTTTATCACGTGCCGAGACCCAAGCCCAGTTGGGCAAATATGAGTCTTATGGCCCATCCGGACCCAAAAGTCACCCTAGCCCCCGCTCCACCCACGCGTTCCTCGTCAACCAGACGCTGGAGATCCACAAGCGTATGCCACCACTGCATATGCACAAGAGCCCGGCGGACGGAGGGGCTGAGGGAAACGGGCTCGGCGTGGGACCCCAAGGCGGAGACGGTAAGGGTGGCTCGGAGCGGGGCAGCCCTATTGAGAAGTATATGCGTCCGTCGAAGCAGGCCAGCTACTCTCCTCCCGGAAGCCCCATCGAGAAGTACCAGTACCCGATCTTGAGCCTACCCTTCCTCCACAACGACCTGCAAAACGAAACAGACTGGTTGCGCTTCTGGACTAAGTACAAGATGTCTGTGCCGGGCAACCCGGGTCACTACCTGAGCCCCATGGCCGGCCTTCCCAATCCGTGCCAAAGCTTTGTGCCTTACTCTACTTTCAGCTTACCGCCTCATTTTCCCCCGCCGACCCCTTCTGGACCCGAGAGCGACACGCCTCTCGACCTGGCCATGAAACATTCCAAACCCAGTCCGACGCCCAACGGGGCCCTCGTCGCCAAGGAAAGCCGGGCATCGCCCGCCTCCGACAGGGAGACAGATCAGCCGGAGGAAGCCGAAGAGACTTTGCAAGTCCCCAAACCGGAGAAGGTTGATCAGGCCACACAAGATGATCTCTCCAGCAAATGTGCCCACTGTGGCATCGTCTTCCTGGACGAGGTCCTGTACGCCCTGCACATGAGCTGCCACGGTGAGGGCGGGCCCTTCCAGTGCAGTATCTGCCTGCACGCTTGCTCCGATAAGTACGATTTCACAACCCACATCCAGCGAGGCCTCCACCGGGCCGCCCCCGAGGCCAACGCCAACCCCTCTAACCAATGAGCTTTACGGACCTGCAGTCCGAGCACAACTAGAGCAGCGCTCGTACGAATGAATCCATTGACGTGCCAAGACGGATCAAGGTGCCTAAGCAGCCAATGCTAGAAACTTCAGTCAGCATAGCATTTCTGTGGGAGCTCCCAAACACAAACACACTTTTAACGAACAAAAACTGCTTTTTGAAGACATCGGTACATGTAGCTATATATTTTCGTTAGTCCAGATATGTAATTTTCGACAAGGCAGTTCAGCAAGCAAGGTACATCTACTCATTTCTCGTCGTCGTCGTTGTGTGTATTCACAGATTTATGAAAAGTTCTCTGGTTCTGGTAAAAATGAGGATGTGTTTCTGCATGTGTGGCTCGGTGTAGGAAAATGTGGCAGTCGTCTGTCACTATGGCAACAGCATAAATGACTGTCGTCCTCAAACAAACATCCAGCATCCTCAGGGAGTGTGTATGGCTGAATAGACAATATTAGTTTATAGTCTAGTTAACATACTAAATGTCTTAAGTTTGTTTTTGTTTTTTTTTTAAGTTAGGTAAGTCACAGAATTCCATCAGAACTTTTAAGCTGCTGCCTTAGTTGCTGGGATGCAATTCTTATTACTCTAGAAATTTGGGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00248538_00251489.mRNA True 2382 mRNA 0.51 2 247993 252114

Neighbor

gene id symbol gene type direction distance location
CI01000054_00239444_00241646 NA coding upstream 6150 239444 ~ 241843 (+)
CI01000054_00157332_00178926 NA coding upstream 67848 157332 ~ 180145 (+)
CI01000054_00131576_00136719 NA coding upstream 111147 130829 ~ 136846 (+)
CI01000054_00390853_00579795 CSMD3 coding downstream 138739 390853 ~ 579795 (+)
CI01000054_00612177_00613764 NA coding downstream 358221 610335 ~ 614879 (+)
CI01000054_00637123_00665809 NA coding downstream 384759 636873 ~ 666129 (+)
CI01000054_00666830_00754317 CSMD3 coding downstream 414278 666392 ~ 754317 (+)
CI01000054_00869317_00877277 RAD21B, RAD21 coding downstream 615012 867126 ~ 878129 (+)
G229638 NA non-coding upstream 60965 184874 ~ 187028 (+)
G229637 NA non-coding upstream 149971 97764 ~ 98022 (+)
G229630 NA non-coding upstream 159611 88152 ~ 88382 (+)
G229670 NA non-coding downstream 50741 302855 ~ 348887 (+)
G229682 NA non-coding downstream 119516 371630 ~ 371932 (+)
G229717 NA non-coding downstream 608486 860600 ~ 861220 (+)
CI01000054_00916253_00919736 NA non-coding downstream 664002 916116 ~ 919986 (+)
G229736 NA non-coding downstream 665875 917989 ~ 918274 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 974221 1226335 ~ 1230329 (+)
G229760 NA other downstream 1014236 1266350 ~ 1273750 (+)
G229936 NA other downstream 1144966 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 1326321 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 1398846 1650242 ~ 1666115 (+)

Expression


Co-expression Network