Item | Value |
---|---|
gene id | CI01000054_00390853_00579795 |
gene name | CSMD3 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000054 |
NCBI id | null |
chromosome length | 13006764 |
location | 390853 ~ 579795 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
csmd3 | Predicted to be involved in regulation of dendrite development. Predicted to be located in plasma membrane. |
id | name | namespace |
---|---|---|
GO:0016021 | integral component of membrane | cellular_component |
id | description |
---|---|
K17495 | CSMD; CUB and sushi domain-containing protein |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000054_00390853_00579795.mRNA | True | 915 | mRNA | 0.49 | 5 | 390853 | 579795 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000054_00248538_00251489 | NA | coding | upstream | 138739 | 247993 ~ 252114 (+) |
CI01000054_00239444_00241646 | NA | coding | upstream | 149010 | 239444 ~ 241843 (+) |
CI01000054_00157332_00178926 | NA | coding | upstream | 210708 | 157332 ~ 180145 (+) |
CI01000054_00131576_00136719 | NA | coding | upstream | 254007 | 130829 ~ 136846 (+) |
CI01000054_00612177_00613764 | NA | coding | downstream | 30540 | 610335 ~ 614879 (+) |
CI01000054_00637123_00665809 | NA | coding | downstream | 57078 | 636873 ~ 666129 (+) |
CI01000054_00666830_00754317 | CSMD3 | coding | downstream | 86597 | 666392 ~ 754317 (+) |
CI01000054_00869317_00877277 | RAD21B, RAD21 | coding | downstream | 287331 | 867126 ~ 878129 (+) |
CI01000054_00879731_00882536 | MTERF3 | coding | downstream | 299936 | 879731 ~ 882597 (+) |
G229682 | NA | non-coding | upstream | 18921 | 371630 ~ 371932 (+) |
G229670 | NA | non-coding | upstream | 41966 | 302855 ~ 348887 (+) |
G229638 | NA | non-coding | upstream | 203825 | 184874 ~ 187028 (+) |
G229637 | NA | non-coding | upstream | 292831 | 97764 ~ 98022 (+) |
G229630 | NA | non-coding | upstream | 302471 | 88152 ~ 88382 (+) |
G229717 | NA | non-coding | downstream | 280805 | 860600 ~ 861220 (+) |
CI01000054_00916253_00919736 | NA | non-coding | downstream | 336321 | 916116 ~ 919986 (+) |
G229736 | NA | non-coding | downstream | 338194 | 917989 ~ 918274 (+) |
G229847 | NA | non-coding | downstream | 390784 | 970579 ~ 976960 (+) |
G229848 | NA | non-coding | downstream | 398908 | 978703 ~ 981912 (+) |
CI01000054_01227110_01229796 | EEF1A1L1 | other | downstream | 646540 | 1226335 ~ 1230329 (+) |
G229760 | NA | other | downstream | 686555 | 1266350 ~ 1273750 (+) |
G229936 | NA | other | downstream | 817285 | 1397080 ~ 1407130 (+) |
CI01000054_01578022_01579167 | NA | other | downstream | 998640 | 1578022 ~ 1579356 (+) |
CI01000054_01650242_01665628 | PLEKHO1A | other | downstream | 1071165 | 1650242 ~ 1666115 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_015034 | csmd3a | coding | NC_007130.7 | CM002903.2 | 44123618 ~ 44955710 (-) |