CI01000054_00879731_00882536 (MTERF3)


Basic Information

Item Value
gene id CI01000054_00879731_00882536
gene name MTERF3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 879731 ~ 882597 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00879731_00882536.mRNA
CGATGTGTGAGTTTGTTGCTCTCGAGGCCGTTATCTGCAGCTCTCCAGCCATCGACACGCACACTGCAGCAGCGCTCGCATCACGTCCTGCTGCAGCTCAGCCGCGGACAGCCGCCTGTCCACAGTCTCACACAGAGACACGGTAGAGAGACATGGACATCGTTTGGAAGACGAAACTTAACGGACCACCAGGCTGCTTCATCAGAGGTCTATAATAATAAGACTGATCTCGCTCAGAGAGAGGAAATCAGTGAGGAGGAAGCAGTCCAGATCCAAGTACCTTCTGCCCTTCCGCCGGACTCTTTCACACTCAGACCTTATGTGGATAAATCAGAAACTCTCAGCAAACTTGTCCAGCTTGGTGTCAACCTGTGGGAACTGGAGCGGAGACCCAATGTGGGCTCCATGCTGGTTAGGCTTGACTTCCATGCTGATGTTGCACCCAAACTACTCTTCCTCAAAGATCTGGGAGTTGAGGAGTCTAAACTGGGCACACTGCTCACCAAGAACCCCTTCATCCTCACAGAAAGCCTGGACAACCTTGAAGCCAGGGTGTCCTATTTGAAAACAAAGAAGTTCAGTCAGGAGTCTGTGGCCGCCATGGTGAGCAAAGCTCCATACCTGCTTAACTTCAGTGTTGAGAGGCTCGACAACCGCCTTGGATTTTTTCAGCAGCATTTGGGACTCAGTGCTGAGAAGACCCGAAATGTTGTGACTCGTCTACCGAGACTACTGTGTGGAAGTTTAGAGCCAATTAAGGAGAATCTAAAGGTTTGTGAACTGGAGTTTGGATTTCGTGGAAATGAAATCCAACACATTGTCACCACTGTTCCTAAAGTTCTAATCGCTAATAAAAGAAAACTCACCCAAATATTTGACTTCGTTCACAACACCATGGATGTTCCACACTCACTTATTGCAAAGTTCCCACAGGTCCTTAATGCCAAATTCCTTCGCATCCGAGAGCGGCACTTGTTTCTAGAGTACTTGGGCCGGGCTCAGTACCAACCATCTCAACCCAACTACATCTCTTTGGATCGCTTGGTGTTCCTGCCTGATGACGTTTTCTGCTCAGAAGTAGCATTAGCCACTCTTGAAGACTTCGAAAGATTTCAGAAAACGTTGTAGATGTACAGAATTAAATTAAATTACTTTTTTATAGTTGGGTTGTATGATCATAGTTTTATAA

Function

symbol description
mterf3 Predicted to enable double-stranded DNA binding activity. Predicted to be involved in mitochondrial ribosome assembly. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be active in mitochondrion. Orthologous to human MTERF3 (mitochondrial transcription termination factor 3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00879731_00882536.mRNA True 1189 mRNA 0.47 7 879731 882597

Neighbor

gene id symbol gene type direction distance location
CI01000054_00869317_00877277 RAD21B, RAD21 coding upstream 1602 867126 ~ 878129 (+)
CI01000054_00666830_00754317 CSMD3 coding upstream 125414 666392 ~ 754317 (+)
CI01000054_00637123_00665809 NA coding upstream 213602 636873 ~ 666129 (+)
CI01000054_00612177_00613764 NA coding upstream 264852 610335 ~ 614879 (+)
CI01000054_00390853_00579795 CSMD3 coding upstream 299936 390853 ~ 579795 (+)
CI01000054_00885259_00886020 NA coding downstream 2662 885259 ~ 886020 (+)
CI01000054_00916253_00919736 NA coding downstream 33656 916116 ~ 919986 (+)
CI01000054_00992036_01004247 NA coding downstream 109439 992036 ~ 1004392 (+)
CI01000054_01007770_01028369 MATN1, SESN2 coding downstream 125055 1007652 ~ 1028832 (+)
CI01000054_01042925_01056338 NA coding downstream 160294 1042891 ~ 1056561 (+)
G229717 NA non-coding upstream 18511 860600 ~ 861220 (+)
G229682 NA non-coding upstream 507799 371630 ~ 371932 (+)
G229670 NA non-coding upstream 530844 302855 ~ 348887 (+)
G229638 NA non-coding upstream 692703 184874 ~ 187028 (+)
G229637 NA non-coding upstream 781709 97764 ~ 98022 (+)
G229736 NA non-coding downstream 35392 917989 ~ 918274 (+)
G229847 NA non-coding downstream 87982 970579 ~ 976960 (+)
G229848 NA non-coding downstream 96106 978703 ~ 981912 (+)
G229849 NA non-coding downstream 101003 983600 ~ 985153 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 343738 1226335 ~ 1230329 (+)
G229760 NA other downstream 383753 1266350 ~ 1273750 (+)
G229936 NA other downstream 514483 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 695838 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 768363 1650242 ~ 1666115 (+)

Expression


Co-expression Network