CI01000054_00885259_00886020


Basic Information

Item Value
gene id CI01000054_00885259_00886020
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 885259 ~ 886020 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00885259_00886020.mRNA
ATGGCGTCGAGGGCACCAGCTGCAACCGGCAGGCTCCTGGTGGGCTTCAAAAAGTGGTACTACAACGCATGCGGTTTCAACAAACTTGGTTTGATGCGGGATGACACCATCTACGAGGACAGTAATGTGAAAGAGGCCGTTCGTCGGCTTCCAGAACCGGTTTACAATGACAGGATGTTCCGCATCAAGAGAGCTCTGGATCTTACCATGAAGCAACAGATTCTTCCCAAGGACCAGTGGACTAAATATGAGGAG

Function

GO: NA

KEGG:

id description
K00417 QCR7, UQCRB; ubiquinol-cytochrome c reductase subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00885259_00886020.mRNA True 255 mRNA 0.51 3 885259 886020

Neighbor

gene id symbol gene type direction distance location
CI01000054_00879731_00882536 MTERF3 coding upstream 2662 879731 ~ 882597 (+)
CI01000054_00869317_00877277 RAD21B, RAD21 coding upstream 7130 867126 ~ 878129 (+)
CI01000054_00666830_00754317 CSMD3 coding upstream 130942 666392 ~ 754317 (+)
CI01000054_00637123_00665809 NA coding upstream 219130 636873 ~ 666129 (+)
CI01000054_00612177_00613764 NA coding upstream 270380 610335 ~ 614879 (+)
CI01000054_00916253_00919736 NA coding downstream 30233 916116 ~ 919986 (+)
CI01000054_00992036_01004247 NA coding downstream 106016 992036 ~ 1004392 (+)
CI01000054_01007770_01028369 MATN1, SESN2 coding downstream 121632 1007652 ~ 1028832 (+)
CI01000054_01042925_01056338 NA coding downstream 156871 1042891 ~ 1056561 (+)
CI01000054_01087465_01101501 AHDC1, METTL24 coding downstream 200912 1086932 ~ 1101774 (+)
G229717 NA non-coding upstream 24039 860600 ~ 861220 (+)
G229682 NA non-coding upstream 513327 371630 ~ 371932 (+)
G229670 NA non-coding upstream 536372 302855 ~ 348887 (+)
G229638 NA non-coding upstream 698231 184874 ~ 187028 (+)
G229637 NA non-coding upstream 787237 97764 ~ 98022 (+)
G229736 NA non-coding downstream 31969 917989 ~ 918274 (+)
G229847 NA non-coding downstream 84559 970579 ~ 976960 (+)
G229848 NA non-coding downstream 92683 978703 ~ 981912 (+)
G229849 NA non-coding downstream 97580 983600 ~ 985153 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 340315 1226335 ~ 1230329 (+)
G229760 NA other downstream 380330 1266350 ~ 1273750 (+)
G229936 NA other downstream 511060 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 692415 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 764940 1650242 ~ 1666115 (+)

Expression


Co-expression Network