CI01000054_00979998_00989171 (TCEB3)


Basic Information

Item Value
gene id CI01000054_00979998_00989171
gene name TCEB3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 979998 ~ 989171 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_00979998_00989171.mRNA
ATGGCGGAGGAGCTATTGGAAGCAGTCGAGAAGTTGCAGTTGAGGCTCGCAGAGAATCAAGAGCCTCGCAAGGTAATAAACCTTTTCGCTGAGACGAAGCGAACGCTTTACTTCGACACTTTCGCACCGCGTATGACTGTGTTATACGCGCTTCTGCTCGTGGCTAGTCAGAGGATCGTGCAGTATTGCTATCCAGAAATCCCACGTATAACAATTACCACAGCAGCAGACCGTGAAATGGATGATCGGCCACGACGACACTTGAAAGTGCACTTAAATGTCTGTTTTGGTGATTCTGGTGTAAAACTTCTGAAAACTCTCAAAAGGTTGGGGGAGCTGCCTATAACAGTAGACATCCTGGTGGAAACTGGCATTGGAAAGACTGTGAATTCTCTGCGCAAACATGAATTTGCTGGGGAGGCAGCGAAGAACCTTGTGGCCAAGTGGAAAAAGCTGGTGCCAGAGAGATCTGCAGACAGACCAACTGTAAAGGAGGGGCGTTCCCACTCACGCATTAATGAGTCTGGAGGGCACAAACGAGTCCGGGAACGGTCTCCAGAGGAGCCTCCGCTCATGGAGGAGGAACAACACGACGAGATGGAATACCAACCTGGCTACTCGCCCTCCCCTCCACAGCACTACAGCTCACCGTACAGACACGACAGTGCAAGGGGGTATCAGTCAGATGAGTATGAAAGCCCTCCAGAAGAGGAGCCGGAGCTGGAGCTGGAGCCAGAGCTGGAGCCGGAGCTGGAGCCCGAGCCCAGTCCCCCACGAAATGACATTAGACACAACAAGCCACACAAAGAGCCAGTCAGAGAGCACAATTCCCAAGACATACGGGAACAGGAGAGACGGAAGCACCGTCCCACGGGTGGCGGCAGCAGCAAGGAGAGGACGCACAGAGCTGAAAGAGAGCAACAGGGAAAATCAAGGGAGAGGGCGGAAGTTCCAGAGAAAATGGATGAGGATGAGGAGCCATTTGAAGCTCCAACCATGTCTTTCGAATCCTTTCTCACATATGACGCTCCGACCCCAAGCAAAAAGAAGAAAAAGCAGCCCTCGCGACCCCCTCAGCCTCCTGCCTCGATTCCTTCGGCTTCCTCTAAGTCTGGCAAGGCCAACGGGACCAGTAGTAAACGCTCAAAGTCATCCTCTTCCTCGGTGACCACGCCTGCTGTTCAAGAGAAACGCAGGAAGGTAGTGGATGTGGTTCCCACTCTTCCTGATATCCCTTTGCCAGCCATCCAGCCCAACTACAGACCACTGCCCTCCATTGATCTTACACCACTGTCCCCCCAGAGACGCAAAATCCCAGTGTCATACGACGAAGAGGATGCTGGCTGCGCAGGTCGACGGCTGAACTCCAAAATGGTGGTGTACTCTGGGTCCAAGACTGCGTATTTGCCGAAAATGATGTCTCTGTATGATCAGTGCATTAGAGTCCTGCAGAACAATATAGATTCAATTGATGAAGTGGGCGGAGTGCCATTTGAGATTCTGGAGCCAGTTCTGGAGAGATGCACGCCTGAGCAGCTTTACCGGATTGAGCAGTGTAATCAGTATTTCACAGAGGAGTCAGATGATCTGTGGATGAGACACTGCCGGCGGGATTTTAAACGTGATACCCCTCAAGAATATGAATCCTGGAGGGAGATGTATCTCCGGCTCCATGAAGAACGGGAAGAACGTCTGCGCAAGCTCACGATGAACATCAGTTCTGCCCATGCAAACAAACCTAAAGGGCGGCAGGTTAAAATGGCATATGTCAACTCTGCCGCTAAGCCGCCACGAAATATCCTCCGTCTACAAGAGAAGTTTGGCACTAAAAATGGTTCTACCAGCACAAGCGCTGCTCCTCCATCTGCCAGGATCAGACCAGCAACAAACTACAGCGCCCACAGCAGATCCACTGAGGTTGGTCAGTCTTCTTTCAGCAGCCCCCCTGAGTCCTCCTCACGCTCCTCTGCTCCCAGCACAGCTGGTGGACACAGTGCCAGAGAAAAACCACAAGTCAAAA

Function

symbol description
tceb3 elongin-A

GO: NA

KEGG:

id description
K15076 ELOA, TCEB3; elongin-A

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_00979998_00989171.mRNA True 2020 mRNA 0.52 12 979998 989171

Neighbor

gene id symbol gene type direction distance location
CI01000054_00974025_00979306 PITHD1 coding downstream 692 973900 ~ 979306 (-)
CI01000054_00965111_00970121 LYPLA2, LYPA2 coding downstream 9877 964642 ~ 970121 (-)
CI01000054_00929337_00955240 ANKIB1A coding downstream 24324 929132 ~ 955674 (-)
CI01000054_00924015_00926256 GATAD1 coding downstream 53742 923734 ~ 926256 (-)
CI01000054_00898039_00902381 NA coding downstream 77617 897542 ~ 902381 (-)
CI01000054_01115294_01116274 GPR3, GPR6, GPR186 coding upstream 125522 1114693 ~ 1116822 (-)
CI01000054_01151083_01156699 FAM83HB coding upstream 161553 1150724 ~ 1158172 (-)
CI01000054_01203148_01209012 PPT1 coding upstream 213734 1202905 ~ 1209135 (-)
CI01000054_01246516_01250511 KLHL43 coding upstream 255710 1244881 ~ 1251249 (-)
CI01000054_01257527_01259314 NA coding upstream 268356 1257527 ~ 1259314 (-)
G230328 NA non-coding downstream 64641 915135 ~ 915357 (-)
G230145 NA non-coding downstream 91839 885254 ~ 888159 (-)
G230148 NA non-coding downstream 93773 863958 ~ 886225 (-)
G230311 NA non-coding downstream 118752 860921 ~ 861246 (-)
G230308 NA non-coding downstream 122437 857336 ~ 857561 (-)
G230238 NA non-coding upstream 4221 993392 ~ 996451 (-)
G230335 NA non-coding upstream 16095 1005266 ~ 1005502 (-)
G230336 NA non-coding upstream 26552 1015723 ~ 1019141 (-)
G230341 NA non-coding upstream 31503 1020674 ~ 1020880 (-)
G230342 NA non-coding upstream 40450 1029621 ~ 1029829 (-)
G230178 NA other upstream 196362 1185533 ~ 1230135 (-)
G230923 NA other upstream 1848066 2837237 ~ 2837682 (-)
CI01000054_02857402_02860451 NA other upstream 1864970 2857402 ~ 2860573 (-)
G230908 NA other upstream 2068477 3057648 ~ 3063343 (-)
G231645 NA other upstream 2992676 3981847 ~ 3982823 (-)

Expression


Co-expression Network