CI01000054_01087465_01101501 (AHDC1, METTL24)


Basic Information

Item Value
gene id CI01000054_01087465_01101501
gene name AHDC1, METTL24
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1086932 ~ 1101774 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_01087465_01101501.mRNA
CTTTAAATTGCCAAATGTAAAGCATGTAAAGCAGTTGCCTATCCACTGAGACATATGTCGTATTGCCATAGTGAGGCCTGCAATCTATTGCATTGGAAAGGAAAACTATGTAACCATGGTTACCGTTCCACTCATATTCAATTGCCATGGTTACAACTGTTCTCTAACTGTATTGCCATAGTGACAAGTGTCCTTTCGCCCACAGGGATAACACAAAGCATGGCCACAGCAGCAGACATGGTAAGAACAACTGCAGTTATTTCAATAACATTTTTAAGTATGTTGTACAGTAATCCTCAACAGTAAGTCTTTTTGTGTGTTTTGTCCCCTAGGAAATAACTGCACTCCTGAAAACTGGAAACCCCAAGACTGTGTGAAGCCTGATGGTCCAATTCATTCTGCCTAAGTATAACAGTGAGAGGACAGTGATCAAACATCCTACCTACTGAACTGGACCCAGTTAAACCTAACACGGAACCATCACTGACACATATACATAAATACGAAGATCCTGATCTGCAATTTTGGGGGTAATGAGCCGTCTGTCAGGTCGCCTGCGCTCTGGAGGTGTTCGCTTGACTTGTGAGGCACTGGCTGACAAAGACTGCAGTGATGATGAGGGCCCCTCTCTATGGGAGGGGGATGAAGAGCAGGGGGGCACATCTGTAGGACCCACTGATTCCACTCCAGCCAGCTCACTACATTACAGCTTTTATTCACCTCCCTCTTTAGCTAATGGTCTGCGGAACCATGAAGAGCAACTTCGACGTAGGGCAAGGAGACGTCGGCAGACAGAATGCGTGGAGCAATCAGCCCCTTTGTTACATACCAGCCCTCCCCCAAAGACTCTGTCACCTCCTCAGTACAACCCTTCCTCTTTACCTAAAGAGGAGACAGAACACAATTCAACATGTAAGCCAGAAATGGATCGCACCACTGACCCAGACCACGTTCGTATAACAGGCCAATCCACTGTCATGACCTCTGTGGAGGCTGAAAGGAAGTATACTCTACGGAGCTCTGGCCGACCACGTTTCCCCTGCCATCTTCGAAAATCATCACGTTTACGTAGAGCTGCTGAGGACAGTATGTTCAAAAGGGAACTGGACCAACAGGATGAAGAAGAAGAGGAGAATAGAGTCTGGAGAACAGAGGAAATAAGGCAGATGGAGGAGCATCCCCCAGAGGTGTGTGCTGCTGCCTCATCGTTTGAGGTTTTACCATCGCCGGCTATATCAGCAGATACACCAAATCATAGCATGAGAACGTCAGAAGGAGAGGGCATTATTACTCACCATGCAGTTAGAGGGAAGCGACAGGGACGTTATTTAGGTGTGAGAAAGATTGTGGTAAAAGTAGCCAGAATACCTGTTCACATGAGCCGACGACAGAAAAGCTACAAGATCTCATCCCTGGAGCCAGCGTGTGCTGGACTCCATGGAGAAGGGGTCCCAACAGGAGAGGGACCTGAGGGGGCTATAGGAGGTGAGCCAGGAGCTAATGTTCCCAGAGAGCCAACCGCACTTCTCCGCATGAAAAACAATGGAAAGAGTGTGATGGTAATGTTTCCACCGGGAGAGCTTCCTGTAATCTTGAAGCGACGCAGGGGGCGCCCCCCTAAACAGGCATTACCAGGACAGCCTGACATGCATGAAACCAGAGTAGGAGCAGCCAGTGCAGCAGAGCCAAAAAAAATTCGGAGGCGGCGAACAGTAAAGCTACCGTCTCCACAGCCCTCATATGTTAATGATACCAATGATGTTAAAGTAGAATATGCAGATGTCCTTTCCAAACTGGCCTTCTTAAATAGACAACCTCCCAGCACAGGCCGCTGCTCCCCTCCACGCTGCTGGACCCCAACAGAGCCTGAGACTTTCCACATACCACCAGAAAATCCATCCCTTTCCACTCTTTTGCACCGTCTCACAGGATTCCGCAGAAGAGGTGGCCGTGCAGGCTGTATGGGGAGTAGAGGAGGGGGAGCAGCTGGATCCTCTGATTCTTTTAAGAGATCATTCAGTGACTTCTTTGAAACAATTGGCAAAAAGCGCAAGGTCCCCGCATCTGAACCAGGAACTCCACGAAAAAGAGGCAAGGGTGTTGCTGGGGGAATAAATAGGGCAGCTTTAGGTGACACTGTGCAAGGTGAGAAGGTTAGAAAACGCCGGTCACGAAAGAATGGGGCTTTAAAAAATTGTACAGGTGCCCAAGAGCAAGACTGGCAAAATGAGAACAGCAGTTGGATAGGGAAAGGTGACAGAGATAATCCTGAGAAAGCAAGTAGTTATCAGAGTCCTTGTTCCCCTCGTGGAAGTTTTCAAAGCAGTGAGGCTAGTAAGGGGGGGATGTACCACAGCCCCGGTATGAGAGGGGTGTGCAGTGGAGAAGAGTCTCAGGGAATGTTTGCAGGATATTTTCGCTCTCTGCTTGATTCTGATGACTCCTCTGACCTGCTAGATATTTCCATGTCCAGCCCTGCTGGACGGCAGGAAGGCCGTAAGGTCACCCCAGGATATGAGGGTGGCAGCCCTGGTGCAGCCCATCGTTGGTCTCCTGCCTTTCCTAAAAGAAGTCCTAAAGGAGCAGCCTGTCTTGGGGAAGGAGCGCAATTATCCTCACCCCAAACTCAAGGCAGTTCAGCAACTAAACCCTCATATTCATATAGTGTCTCACAGACTTCTCCAACTCCATCCTTCCCTAAATCCCCTGCACTCTTGCTTTCCCGTTCACCCAGCTCTCCACATCCATCTGGAGGTTTTCCTCAATATCCACCTAGTTATAGTGCTGGGGTTCCTCAAGGTGGAAGTATTTACCCCCTCCCTCAACAGCAGCAGCAACAGCAACAGCAAAGGCCAAGTGACTGTAGCTTTACATATGGTACAAAAACTCCCTCTGTTCCCTCTGCGCAGTGTCAGATGAGTTATTCCAACTACCAGGGTTCTGCCAAGCGTGGTTATAGTGGATATCCAGGCCAACCCCATTCAACCATACAGAGAGGGGACTCTGGCGCAACCTCACCAGGTGGAAGTTATATGTCAGTGTCAAAGTCCAGCCCATATTCCTTATCCTCTTCTCCGCCTGAGGGTTGCAGACAATACACCTCTACAGCTCAGTGGGGATACAGGCAAGGGGGAAATAACTGGGGTAGTGATGCATATGGCACTCATCAGTTTCATGGTTACTCTGATTATGGGGTAGCTGGAACTGGATCAGAATCCAAAGACATTCTGGACATCTCAAACTACACACCCCAAAAAGCCAAACAGCGTCCCTGCCCTGAGACACTCTCTGAATCCTCCTCAGACTCTTCTCACACTGGTGGAGGAGGGATGAGTGTTGTGGGGGGAGCATTTCGCCCAAGGGATGTTCCTATGCCTGAGGGTCAGTCTAGCCTTTCAAGCCTGGAGAAGCTAATGCTTGACTGGAATGAGAATTCAGCAGGCCCTTCTTACAACTGGAGTCAGAATGTACTATTCCAAGGGGGGGCAAAACCAGGTCGTGGGCGAAGGAAAAAGTCTGAGACACACAATGAGAAGGAAGCATGCTCTGTTCCCCCAGGTTCACCTGCCAGTCCTCCTATGCAAGGAGGGCCAAAACGTAGTGCTACAGGTGGTAGACAGCCCAGGGGAGCCAGAGGCAGAGGAGGATTCTCTCCTTGCCAAAGAGATCGTCCCCCACCACCGAAAACCAAATCTCAAAAGCCTTCAACCCCATCAGGCTCAGGGCAGATGGGTTCAGGGGGTCTATACCAAGAAACATTGGACTACTACAGTGGAGATAGTAGTAGCCTGTCACCTCTTAGCCATGCCCCAGAGTCCTGTGAATACCCCTCTCCATATTCTGTCCACACTTCTACTCCCTCCTCAGATGAGAGATTTGCTCATGTCTATCCTCCAGACTCTGCCTCTGTGTCCCCCAGTTTATCAAATCAGTCAGATGCCCTAAAGCAGTATCCTAAACCTGGTCCTCCCTCACAGACTTATGGGCATGCTGCCAGGACTTTTAGCCCAACCCTCTCCCCAACCCCTCGGCTCTTGCCGCAGTGTGGTTCCGCCATGAGCCCACATCGGGTCCCTAAAGATCAGTTCTCCCAGTATGATTCCCCGAGTTACAGTGGCTCTCCCTGCTGGTATGGGCAAGGAGGAAGTGTCGCTGGCAGCCCCCAAAATTATGAGGAACAGCGAACACCAGCAGTCTCTTTGCCCTCCCACAAACGGGACATGTCACTGATGGTCTCTGGGATGAGAGTTCCATCCCATTCATCTTACCCTTCCCCTTTACAAAGAGGTCCTTCCATGTCAACTTGTGTGAGTGGGACACTGGACTCTTCCCCTCAGCATGATGAGATGGGTTACCATGGTAACTTGGACAGCTATGCACCCGTGGGACACCGTTATGCACCCCAAACAGCCCGGGGAGGGTGCAACTGTGCAAATGTGATTCACACACACTCACATTTCACTGATGCCCAAAAACCCAACCAATTCTCAAAGCCTCCTCTGATTTTGTCACTGGGGAGATTACTTAATCCTAAAGGTCCACTTCCTTCAGCATCTATGAATGGAATGTGTCCAAATTTGATCCCTTCAACCGCCGCTCTGGATCTGCAGCATGGTCACTTTGTGCCCAACATCCAACTCTCATTTGTGTGTTTTTATCATAACAGGAGGACAGACACCCATGCACTGCCCCTGAAAGATGCTGTCCTTGTCAAGATGTTTAAAGGCCAGGGTCTATCGGTGCTAGTGCTCGTCCAATTACTGGTTAGTTTAACGGTGCCGCGCGCATTTAGCAGCACGAGCGATGACCAACCTGCTTTTCTCGTTATAAGCATAGAGAAGAATGATGGCGGGTCGCTGACGTCTGAGGTTAGAAAAAATGAGCGGGATTTGGAAAGCGGTCTCTGGACTGACGAGGATTCAAGACTGACAGGATACGAAGACGAAAACGAGCTTGAAGGACCTCAGGCCGCAGCCAGAGAGCTGATACTGCAGCCATGGGCATCAAAACAACCCTCGTTTTTTGCAGAGCTGCTGCGTCTTACCCAGTTCATCACCACAACAGAGGTGAACTGCTCTGTGGTTCAGGATTCAGATGGGAATCAATCTAAACACTCTCCTGGTTACTCGGATGTTTTATGCATTAACCACTGGAAGGGCAAAAGAGGCTGTGTGGCCTACTCATTCAGTCTGGATGGGAAGGATGCTGCATTTTTAGACACAGTGTTGTATGCGGGGTGTGAGGTTCATCACTTTGACCCCAGCGGTCGAGGGGGTCGAGAGCCTGCATATATTAAGAATCATCGGGCTTGGTTAGACTGGAGAAACTCACGCAGTCACTCACAAGCAGGCCTCATGGGTAATGTACAGCATAGGCTGCTTGACATTATGGAGTCCCTGGGCCACACCACGGTGGATGTCCTGTGTATGGATTTGGAGAGCGCCGAATGGCGCATTTTAGAAAGCTGGATTAAGGATGGAACTCTCAAAAGGATCAATCAGCTCATTCTGACCATTCATCTGCAGTGGGCGGGGTTTGAGGTGGGTGGAGATGAAGAGGAGGTGCTCATACACACTCAGCTGGATAAGGACAAGAGAGCAGGCCAGATAACCCACTGCAAAACCTGTATAGACACAGAAGCAAAACTGAAAAAGACAGATGACAGATGTGTCTAAGAGTACTTTAAACCAAAGCAGGGTTGTTTAATGAAATTGACATGTTAAATGCATACAAATATACATCACATTTTAAAGAGGTAAAGTTGCATATTAGTATGATTTGTTTCTGTCTACATGCTAAGAAATGCCGTCTAGTGGTTGTGAACGGTACTGCATTGTGCGCGCAATTAATTCTATAATCATTTAACAGTCATATTACATTCACTTTAAAGTCATTTTCATACAATAGGGCTACGTGCAATATTTTTCAAGTGCATTGTTTAAAATGAA

Function

symbol description
mettl24 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human METTL24 (methyltransferase like 24).
ahdc1 Human ortholog(s) of this gene implicated in Xia-Gibbs Syndrome. Orthologous to human AHDC1 (AT-hook DNA binding motif containing 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_01087465_01101501.mRNA True 5948 mRNA 0.49 11 1086932 1101774

Neighbor

gene id symbol gene type direction distance location
CI01000054_01042925_01056338 NA coding upstream 30371 1042891 ~ 1056561 (+)
CI01000054_01007770_01028369 MATN1, SESN2 coding upstream 58100 1007652 ~ 1028832 (+)
CI01000054_00992036_01004247 NA coding upstream 82540 992036 ~ 1004392 (+)
CI01000054_00916253_00919736 NA coding upstream 166946 916116 ~ 919986 (+)
CI01000054_00885259_00886020 NA coding upstream 200912 885259 ~ 886020 (+)
CI01000054_01103702_01106852 NA coding downstream 1667 1103441 ~ 1106852 (+)
CI01000054_01122882_01126143 NA coding downstream 21108 1122882 ~ 1126784 (+)
CI01000054_01133011_01143370 NA coding downstream 31237 1133011 ~ 1143612 (+)
CI01000054_01173734_01187846 KIAA0319L coding downstream 71960 1173734 ~ 1188947 (+)
CI01000054_01190021_01201007 CAP1 coding downstream 88247 1190021 ~ 1201723 (+)
G229872 NA non-coding upstream 27781 1058008 ~ 1059151 (+)
G229865 NA non-coding upstream 73531 1013175 ~ 1013401 (+)
G229864 NA non-coding upstream 75804 1010721 ~ 1011128 (+)
G229849 NA non-coding upstream 101779 983600 ~ 985153 (+)
G229848 NA non-coding upstream 105020 978703 ~ 981912 (+)
G229883 NA non-coding downstream 20318 1122092 ~ 1122351 (+)
G229806 NA non-coding downstream 42359 1144133 ~ 1144557 (+)
G229770 NA non-coding downstream 44516 1146290 ~ 1151146 (+)
G229831 NA non-coding downstream 59428 1161202 ~ 1161520 (+)
G229891 NA non-coding downstream 66837 1168611 ~ 1168843 (+)
CI01000054_01227110_01229796 EEF1A1L1 other downstream 124561 1226335 ~ 1230329 (+)
G229760 NA other downstream 164576 1266350 ~ 1273750 (+)
G229936 NA other downstream 295306 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 476661 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 549186 1650242 ~ 1666115 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014288 ahdc1 coding NC_007130.7 CM002903.2 43439401 ~ 43500299 (+)