CI01000054_01227110_01229796 (EEF1A1L1)


Basic Information

Item Value
gene id CI01000054_01227110_01229796
gene name EEF1A1L1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1226335 ~ 1230329 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_01227110_01229796.mRNA
GTATAAATTCTCCAACCAAAGCGTTTTTCTTCCTCTTTCTGTTACCTGGCAAAGGGGAGCAGCAGCTGAGGAGTGATCTCTCGATCCTGGTGAGTACTTTCCCTATCCGTTAGGCCTTTGGTTTTAGTGTTAGGTATTGTTTTTAAAGAACTTTTAGACAATTTGAAAATATTTTTTACTCAAAGTTGGCGGTTTCTTGTTGTTTTCTGCCTTGTTTCGTTACTCTGCGTGCGTTTATAGCGTCAGGTTTATGTAATAATGGTTTATTTCTAATTTTATGTTTTTAATTGTTTCTTATTAGTATGTTTTAGAGGAGATGGGGTTAACTTTATTTTCCCACAGTTTCTGTGTACGTTTATTGTTCAAAGAATGGGAACCGGTAAAAGAACAAAGGCACACTAAGCGACTTGGAGTCACGGGCCTGTTGAAAGCCTTCCACACATTCTCGCATCCAGCAGCTGTTACAAGTGCTCGGGAGAGCCAGATGTCTGCCTCCTTATGGATGCCTTTCAGACATTTTAGATTTTTTCTTGTAACTTAATACCACGCTACTCTAAAGAAACACGTGTCGCAGTTGCCTTATGGTGAACTAGGCCGGTTGAAACTCTGGACCATCATTCACTTGTGTTACGAAATCCCCAATCAAAAGTTTCAGATATGAAAAATCAGTACTTGTCTTGTGCGTTACTAAGCTTCTCCTTTTTCTTTTCTTGTACAGAAACTAATCAATCATGGGAAAGGAAAAGACCCACATTAACATCGTGGTTATTGGCCACGTCGACTCCGGAAAGTCCACCACCACCGGCCATCTGATCTACAAATGCGGTGGAATCGACAAGAGAACCATTGAGAAGTTCGAGAAGGAAGCTGCTGAGGCTGACTGTGCCGTGCTGATTGTTGCTGGTGGTGTTGGTGAGTTTGAGGCTGGTATCTCCAAGAACGGACAGACCCGTGAACATGCCCTCCTGGCCTTCACCCTGGGAGTGAAACAACTTATTGTTGGAGTCAACAAGATGGACTCCACCGAGCCCCCCTACAGCCAGGCTCGTTTTGAGGAAATCACCAAGGAAGTCAGCGCCTACATCAAGAAGATCGGCTACAACCCCGCCAGTGTTGCCTTCGTCCCAATTTCTGGATGGCATGGAGACAACATGCTGGAGCCCAGCACAAACATGGGCTGGTTCAAGGGATGGAAGATTGAGCGCAAGGAGGGTAACGCTAGCGGTGTTACTCTTCTTGATGCCCTGGATGCCATTCTGCCCCCAAGCCGTCCCACCGACAAGCCCCTCCGTCTGCCACTTCAGGATGTCTACAAAATTGGAGGTATTGGAACTGTACCCGTGGGCCGTGTGGAGACTGGTGTCCTCAAGCCTGGTATGGTTGTGACCTTTGCCCCTGCCAACATTACCACTGAGGTAAAGTCCGTTGAGATGCACCACGAGTCTCTTGCTGAGGCCACTCCTGGTGATAACGTTGGCTTCAACATTAAGAACGTGTCCGTCAAGGACATCCGTCGTGGTAACGTTGCTGGAGACAGCAAGAACGACCCACCCATGGAGGCTGGCAGCTTCAATGCTCAGGTCATCATCCTGAACCACCCTGGTCAGATCTCTCAGGGCTACGCCCCAGTGCTGGACTGCCACACCGCTCACATTGCCTGCAAGTTCGCTGAACTCAAGGAGAAAATCGACCGTCGTTCTGGCAAGAAGCTTGAGGACAACCCCAAGGCTCTTAAATCTGGAGATGCCGCCATTGTTGAGATGATCCCTGGCAAGCCCATGTGTGTGGAGAGCTTCTCTACCTACCCCCCTCTTGGTCGCTTTGCTGTGCGTGACATGAGGCAGACCGTCGCTGTTGGTGTCATCAAGAGCGTTGAGAAGAAGGCTGCCGGTTCTGGCAAGGTCACAAAGTCTGCACAGAAGGCTGCCAAGGCCAAGTGAATTTCCCTTTATCACGCTGTTCCAAAGGTTGCGGTGTGTTCCTCCCAACCTCCTGGAATCTCTCTAAACCTGGGCACTCTACTTAAGGACTGGCTAATGCTGATTAAAACCCATCGGAAAAATTTTCGCAGGAAAGGAAAACAACTTGGATTAAGTGTGGCTTTATTGATTGACTGATAGTGCCTCTTTCAGTTATTAAATTTGTGTTAATGGTTTAGAACTGCACCTGTTGCCACAGTAAAATTTGGAAAGAAGCTGCTGA

Function

symbol description
eef1a1l1 Predicted to enable GTPase activity and translation elongation factor activity. Predicted to be involved in translational elongation. Predicted to be located in cytoplasm. Is expressed in several structures, including integument; musculature system; nervous system; pleuroperitoneal region; and skeletal system.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K03231 EEF1A; elongation factor 1-alpha

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_01227110_01229796.mRNA False 2202 mRNA 0.48 6 1226379 1230058

Neighbor

gene id symbol gene type direction distance location
CI01000054_01212755_01219670 NA coding upstream 5596 1212546 ~ 1220783 (+)
CI01000054_01190021_01201007 CAP1 coding upstream 24656 1190021 ~ 1201723 (+)
CI01000054_01173734_01187846 KIAA0319L coding upstream 37432 1173734 ~ 1188947 (+)
CI01000054_01133011_01143370 NA coding upstream 82767 1133011 ~ 1143612 (+)
CI01000054_01122882_01126143 NA coding upstream 99595 1122882 ~ 1126784 (+)
CI01000054_01231236_01238870 NA coding downstream 731 1230789 ~ 1239069 (+)
CI01000054_01353780_01357766 ZCCHC17 coding downstream 123510 1353568 ~ 1357859 (+)
CI01000054_01368287_01374709 DCLK3 coding downstream 138229 1368287 ~ 1375026 (+)
CI01000054_01378423_01387679 CYHR1, CYHR1.L, CYHR1.S coding downstream 148235 1378293 ~ 1388263 (+)
CI01000054_01535826_01544666 NA coding downstream 305768 1535826 ~ 1545550 (+)
G229891 NA non-coding upstream 57536 1168611 ~ 1168843 (+)
G229831 NA non-coding upstream 64859 1161202 ~ 1161520 (+)
G229770 NA non-coding upstream 75233 1146290 ~ 1151146 (+)
G229806 NA non-coding upstream 81822 1144133 ~ 1144557 (+)
G229883 NA non-coding upstream 104028 1122092 ~ 1122351 (+)
G229779 NA non-coding downstream 13716 1243774 ~ 1244341 (+)
G229919 NA non-coding downstream 74819 1304877 ~ 1305133 (+)
G229745 NA non-coding downstream 76312 1306370 ~ 1311971 (+)
G229746 NA non-coding downstream 84574 1314632 ~ 1331530 (+)
G229933 NA non-coding downstream 160709 1390767 ~ 1391918 (+)
G229760 NA other downstream 36292 1266350 ~ 1273750 (+)
G229936 NA other downstream 167022 1397080 ~ 1407130 (+)
CI01000054_01578022_01579167 NA other downstream 348377 1578022 ~ 1579356 (+)
CI01000054_01650242_01665628 PLEKHO1A other downstream 420902 1650242 ~ 1666115 (+)
CI01000054_01725792_01726688 NA other downstream 495611 1725627 ~ 1726793 (+)

Expression


Co-expression Network