CI01000054_01871659_01875753


Basic Information

Item Value
gene id CI01000054_01871659_01875753
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 1871548 ~ 1876210 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_01871659_01875753.mRNA
TTATAAATGGGAGTATTTATGGTACAATATAGGCTACACATTCTCTCACAAACATCCTGACACAGAAAAATTGCTTGGGTCCCGCAGCTGTGCTTTCTATCAATAGGCATCATGACCCACCCCATCAAAGACTCTTTTGCCCCTCTCAGTACCCACAAAGCACATGACCAACAGATACACAAACATGTGCTCAGAGGCTGTTCTGACGTCACAGTCACAGGAGATCACTGTCCAAACAAGATAGGCATGGATCGGAGCGTTCCAAAGGTCCTCTGTGTGTTGCGTGAGCTTCTGGTTTTCTCTACCCTGTTATTAGGGGGCCTGACCTCAGAAAAGCTGGCAGGGAGCAGCCAGATGAGAGAGCAACATCAAATGCTCTCTGGCAGTGTGAACGCACATGGAAAAACAGATGGATATGAGATGTTAAGATATTTGCCCTCTGAAATGCATAGATATTAATGTGCACATCTTTGCAGTTATCTCAAACAGAGGTTGCGCTACAAATACCCATTACCCATCGCTTTGTGATGAAACTTTTCCGTCATGCTCTAATTTTATCCGCCAGTGAAATTTCTTTTTTATCTTTTATTCTGTTCTCGCAATGCGAAAAAGGCATCAGGCTTATATTTGGTGATCTGATGACTCGATTTAATGAACAATTATTCCACAGGACTGATTGAAGTAACAGATCTCTCATTACTCTCCCCAAATCCTCAGTCACATCTCTCTTTTTTTTGCGGCAGCGATTTTAAAATGTAATTTTCTCCTCTTTTCTTTACTTTAAATCTTGATGAGCATCCTCTATATTACGAGGACTGTTACGAGAATGCTTGAATCTGATTGGTTGATGAACATTCTAAGGTATAGTTGTCAATTATTCCTTAGTTAAATGTAGAAATGTTTCTGAAGTAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_01871659_01875753.mRNA True 916 mRNA 0.41 2 1871548 1876210

Neighbor

gene id symbol gene type direction distance location
CI01000054_01725792_01726688 NA coding upstream 144808 1725627 ~ 1726793 (+)
CI01000054_01706858_01711137 NA coding upstream 160298 1705732 ~ 1711250 (+)
CI01000054_01650242_01665628 PLEKHO1A coding upstream 205433 1650242 ~ 1666115 (+)
CI01000054_01639395_01647833 VPS45, VPS45.S coding upstream 222668 1639395 ~ 1648954 (+)
CI01000054_01634335_01637623 NA coding upstream 233626 1634335 ~ 1637922 (+)
CI01000054_01879983_01965668 TRIO, TRIOA coding downstream 3773 1879983 ~ 1966159 (+)
CI01000054_02024879_02026284 NA coding downstream 148669 2024879 ~ 2027615 (+)
CI01000054_02096054_02105211 GNRHR1, GNRH-R coding downstream 219844 2096054 ~ 2105265 (+)
CI01000054_02195667_02196307 CHRAC1 coding downstream 319457 2195667 ~ 2196853 (+)
CI01000054_02225261_02226820 DLX5, DLX5A coding downstream 348317 2224527 ~ 2227071 (+)
G230462 NA non-coding upstream 64243 1767423 ~ 1807305 (+)
G230449 NA non-coding upstream 132214 1735842 ~ 1739334 (+)
G229967 NA non-coding upstream 266943 1604324 ~ 1604605 (+)
CI01000054_01589927_01595736 NA non-coding upstream 282518 1588883 ~ 1595857 (+)
G230496 NA non-coding downstream 133792 2010002 ~ 2010436 (+)
G230500 NA non-coding downstream 140064 2016274 ~ 2018368 (+)
G230475 NA non-coding downstream 205815 2082025 ~ 2082459 (+)
G230606 NA non-coding downstream 229510 2105720 ~ 2108675 (+)
CI01000054_01578022_01579167 NA other upstream 289479 1578022 ~ 1579356 (+)
G229936 NA other upstream 464418 1397080 ~ 1407130 (+)
G229760 NA other upstream 597798 1266350 ~ 1273750 (+)
CI01000054_02289802_02330591 SLC25A13 other downstream 413621 2289802 ~ 2330981 (+)
G230689 NA other downstream 1202292 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 2032241 3848427 ~ 3914231 (+)
G231863 NA other downstream 2530942 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 3746805 5608457 ~ 5634804 (+)

Expression


Co-expression Network