CI01000054_02564258_02570248


Basic Information

Item Value
gene id CI01000054_02564258_02570248
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2563692 ~ 2570405 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_02564258_02570248.mRNA
GTATAAAAGGAATAGTTCCCCAAAAATAAAATTTGAAGCATGTACTGAAGCATGGAATGGGTATTGAAGCTTTCATGTTTCAAAATGGATGTAAAAGCACCATAAACATACCATGAAAGACTTGTGGTGTATATGTATATATAATATCATACTATACCCGCAAGTCTTTAAAGATACTTTTCTGGAGGAAAAGTTTGTGGAATTCTGAAAACTTATATTTATGTATATGTATAGTCTTCTTAAGCTGTGTGCTAATTTAATTATTTTAATAAATGAAATTTGCTTTGTCGTGCCTTAAAACACTCCATACCCAGCCTTATTTGGCTTATTATTACATTAAATCTCCATATCTGTCCATTATAAGCAATATTTTTTGTTAATAAAGGCCATTGTATTTCTTTTAGCCTCATTATTTTTCCATTATGTTCGCTGTTATAAATTGCCAACTTGCTAACTCTCTTTAAACGTCTGTCTCTTTGCATTTTATTGAGGATAGGTTGGTTCAAACGGGCCTCTGTGTGAAAGGAATTGAAGTGTTGTATTTCCTGGGAGGTATATGGGGGGAGATGAGAGTGAAGGTTAGTATGAGTCAAGAATGGGAACCCTCAGCAGTATATGACGTGGCTGAAGACAAAGATTTTCTTGACCTTATTGCACCGAGCAGCACACACCTCCGTGCCTCAGCCTGCCTGTCAGGTCTGGAAAAAACACAGCAGAAGGAAGGAATGGAATCCTGTGGCCTGGAGCTACACGCATACACACAGATAATGGTGGGACGTCGTTCCTCTCGGCCCCGCCCCACCCTGTTCAGGGCCTGTGGTCAGCAAACACAGTCAACCAGGGGCTTTTACGGGACCCCGAAGGCCGAGACCCTCGTTCTAGGGGGGTGTGGTCCAGACTTGATGAGGAAGGAGGATTTTATGGGTTAATGTCAGTCAGTCACTGAAGAAAATACTGCTTTGAGAAACCCTTCCTTTGAATGGCGTCTATGCTCCGCCCATTTCTGAACTTTTCTCCATTGAAACACCATATACGTTGTGATTTCTTGCCTAGTTGTATTTGTTTAACATGACACTGATGGCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_02564258_02570248.mRNA True 1086 mRNA 0.41 3 2563692 2570405

Neighbor

gene id symbol gene type direction distance location
CI01000054_02500503_02511195 SGCE coding upstream 52497 2500503 ~ 2511195 (+)
CI01000054_02417068_02430580 PDK4 coding upstream 132376 2417068 ~ 2431316 (+)
CI01000054_02289802_02330591 SLC25A13 coding upstream 232711 2289802 ~ 2330981 (+)
CI01000054_02272856_02274337 SHFM1, SHFM1.S, DSS1 coding upstream 289167 2271189 ~ 2274545 (+)
CI01000054_02239241_02261796 NA coding upstream 301834 2238324 ~ 2261858 (+)
CI01000054_02589793_02592201 BET1 coding downstream 19388 2589793 ~ 2592926 (+)
CI01000054_02613166_02614884 TFPI2 coding downstream 42653 2613058 ~ 2615458 (+)
CI01000054_02652696_02685815 CALCR coding downstream 82291 2652696 ~ 2685833 (+)
CI01000054_02824071_02824355 NA coding downstream 253620 2824025 ~ 2824642 (+)
CI01000054_02951289_02967370 NA coding downstream 380510 2950915 ~ 2967660 (+)
G230711 NA non-coding upstream 17294 2545634 ~ 2546398 (+)
G230783 NA non-coding upstream 70564 2492896 ~ 2493128 (+)
G230782 NA non-coding upstream 70877 2492563 ~ 2492815 (+)
G230781 NA non-coding upstream 76436 2487023 ~ 2487256 (+)
G230780 NA non-coding upstream 76995 2486432 ~ 2486697 (+)
G230798 NA non-coding downstream 10891 2581296 ~ 2581522 (+)
G230710 NA non-coding downstream 12006 2582411 ~ 2583773 (+)
G230802 NA non-coding downstream 16510 2586915 ~ 2587138 (+)
G230812 NA non-coding downstream 40991 2611396 ~ 2612378 (+)
G230707 NA non-coding downstream 62886 2633291 ~ 2689215 (+)
CI01000054_01725792_01726688 NA other upstream 836899 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 902127 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 981623 1578022 ~ 1579356 (+)
G229936 NA other upstream 1156562 1397080 ~ 1407130 (+)
G230689 NA other downstream 508097 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 1338046 3848427 ~ 3914231 (+)
G231863 NA other downstream 1836747 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 3052610 5608457 ~ 5634804 (+)
G232558 NA other downstream 3423255 5993660 ~ 6041863 (+)

Expression


Co-expression Network