CI01000054_02824071_02824355


Basic Information

Item Value
gene id CI01000054_02824071_02824355
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2824025 ~ 2824642 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_02824071_02824355.mRNA
ATGTAAATGACACTGGAGGAGCTGTTTTAATCATGAATAAAATACCATGCTATGTGAGCATGAAGTAATGGCATTCAGCGGGAAGTTCGCTTCACACAGAGCTCATCCTCTGATGCCTGCAGCTGTCTGTCATGACCCGGGATCAGCGTTCGGGGACAGGGCCCCTGTGGTGACCTCGGGGCCGCTGCATTGCCAGCGAACGGTCTACTCGTGGCAGGCCACAACGCATAGCGTCAGACTGAATCATCGGGTACCCCCAAGGATCCCGAGGGCCGCATCTTTCACCCTGCACTATGCCGATAGGACAGCTATGCGTAAGCAAGCATCTTAAGCATGAAACAACAAAGACAGAGGGTGACATTCCTCTTTAAAAATTTGTTTCTAAGGCTGCAGTGAACCACGGATCACCCCGGATCAAGACAGAACGTACTCACGCGTTCACAAGCACGCTACATCATGCACTGGGATGGGTAAACACACTAATCAAACTGACGTTTGCAGCAGGATGATATATGAGTTCTGAAATGGGTCAAAATATGGGATTAATAATAATTAATAATAATAATTAACTTCGGAAACAATCCTTTTAAATTGTATTTTTCCCAAAAAATATTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_02824071_02824355.mRNA True 618 mRNA 0.46 1 2824025 2824642

Neighbor

gene id symbol gene type direction distance location
CI01000054_02652696_02685815 CALCR coding upstream 138192 2652696 ~ 2685833 (+)
CI01000054_02613166_02614884 TFPI2 coding upstream 208567 2613058 ~ 2615458 (+)
CI01000054_02589793_02592201 BET1 coding upstream 231099 2589793 ~ 2592926 (+)
CI01000054_02564258_02570248 NA coding upstream 253620 2563692 ~ 2570405 (+)
CI01000054_02500503_02511195 SGCE coding upstream 312830 2500503 ~ 2511195 (+)
CI01000054_02951289_02967370 NA coding downstream 126273 2950915 ~ 2967660 (+)
CI01000054_02975008_02985278 EFCAB1 coding downstream 149946 2974588 ~ 2985335 (+)
CI01000054_03016199_03016501 NA coding downstream 191317 3015959 ~ 3016693 (+)
CI01000054_03424472_03425704 NA coding downstream 598412 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 734340 3558982 ~ 3663042 (+)
G230836 NA non-coding upstream 17407 2804028 ~ 2806618 (+)
G230828 NA non-coding upstream 40268 2782936 ~ 2783757 (+)
G230817 NA non-coding upstream 126265 2697490 ~ 2697760 (+)
G230816 NA non-coding upstream 127000 2696513 ~ 2697025 (+)
G230707 NA non-coding upstream 134810 2633291 ~ 2689215 (+)
G230831 NA non-coding downstream 12515 2837157 ~ 2837639 (+)
G230702 NA non-coding downstream 13455 2838097 ~ 2843148 (+)
G230838 NA non-coding downstream 25172 2849814 ~ 2850084 (+)
G230839 NA non-coding downstream 25813 2850455 ~ 2851982 (+)
G230693 NA non-coding downstream 39955 2864597 ~ 2866640 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 519643 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1097232 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1162460 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1241956 1578022 ~ 1579356 (+)
G229936 NA other upstream 1416895 1397080 ~ 1407130 (+)
G230689 NA other downstream 253860 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 1083809 3848427 ~ 3914231 (+)
G231863 NA other downstream 1582510 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2798373 5608457 ~ 5634804 (+)
G232558 NA other downstream 3169018 5993660 ~ 6041863 (+)

Expression


Co-expression Network