CI01000054_02951289_02967370


Basic Information

Item Value
gene id CI01000054_02951289_02967370
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 2950915 ~ 2967660 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_02951289_02967370.mRNA
GTATATAAAAGAGATACAGTCAGAACATCACAGGACAGCACAGACAGCAGCAAAACACAATCCACAAAGAAGAAACCCAGACTACAAGCAAGGTAAATGTTCTTATTCTCATTGTCAATCAATCTATTATTATCATTTATAATTTTAAAAATTATCAAAGCATTTTTTCAATAATTAATATAGTAACATATTATTTCAAATAATATTTTCATGTCACATTTTCAGATGGTTCCAGTGTTGATGTTACTCATGGCAGCTCTTGTAGCTGCAGATGAGCCAATGATGGAACTCTCAGATGCAGTAGAGTCAGTAGATAGTGCCTCTGTCTCTGTGGTTCACTGTGATGCTGCTACTGTGTGTCCTGATGGAACAACATGCTGTCTGAGTCCTTATGGAGTGTGGTACTGCTGTCCATTCTCAATGGGTCAGTGCTGCAGAGATGGAGTTCATTGCTGCCGTCATGGTTATCACTGCGATTCGACATCGACCCATTGTTTGAGGGGGTGGATGAGATTGTCATCTTCTCCTCTGCCAGCCTCCAAAGCTATCCAGAAAACTCAGCTCTTGTAGCTGCAGATGTGCCGACGATGGATCTCACAGACCCAGTTGAGTCAGTAGATAATGCCCCTAGGGTGGTCTGCAGTAATGGTGGTACGTGTCCTATTGGAAACACATGCTGTCGGACTCTTACTGGCTGGGGATGCTGTCCGCACATATTGGTAAAACACAGTAAAATGTGTAACTGATTTATACTTCGTTAAGTTTAAGGTTTAACCCTTATTTTTTCTGTTCACTCCTTCAGGCTGTGTGCTGCGCAGATAGAATTAGGTGCTGTCCCCAGGGTTATCGCTGCAGTGGGGTCCTATGTGTGAAGGGGTGGTTGAGAGCGCCATCTTCTTCTAAATAGGGTTGGTGTTGTAAGGAAGCAACTCCCATGTCCTTGGTGAACCTCTTATCAAAGTCTGTCAAAGTGAAAGAGGCTTTCAAACTCATTAGGGAATAGATTAATCCAACATTCAAACTGTATTCATGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_02951289_02967370.mRNA True 1036 mRNA 0.42 3 2950915 2967660

Neighbor

gene id symbol gene type direction distance location
CI01000054_02824071_02824355 NA coding upstream 126273 2824025 ~ 2824642 (+)
CI01000054_02652696_02685815 CALCR coding upstream 265082 2652696 ~ 2685833 (+)
CI01000054_02613166_02614884 TFPI2 coding upstream 335457 2613058 ~ 2615458 (+)
CI01000054_02589793_02592201 BET1 coding upstream 357989 2589793 ~ 2592926 (+)
CI01000054_02564258_02570248 NA coding upstream 380510 2563692 ~ 2570405 (+)
CI01000054_02975008_02985278 EFCAB1 coding downstream 6928 2974588 ~ 2985335 (+)
CI01000054_03016199_03016501 NA coding downstream 48299 3015959 ~ 3016693 (+)
CI01000054_03424472_03425704 NA coding downstream 455394 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 591322 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 703024 3670684 ~ 3672003 (+)
G230695 NA non-coding upstream 37339 2910956 ~ 2913576 (+)
G230693 NA non-coding upstream 84275 2864597 ~ 2866640 (+)
G230839 NA non-coding upstream 98933 2850455 ~ 2851982 (+)
G230838 NA non-coding upstream 100831 2849814 ~ 2850084 (+)
G230702 NA non-coding upstream 107767 2838097 ~ 2843148 (+)
G230697 NA non-coding downstream 21349 2989009 ~ 3000019 (+)
G230700 NA non-coding downstream 33535 3001195 ~ 3003117 (+)
G230856 NA non-coding downstream 89204 3056864 ~ 3057219 (+)
G231015 NA non-coding downstream 171733 3139393 ~ 3139663 (+)
G231209 NA non-coding downstream 391611 3359271 ~ 3359533 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 646533 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1224122 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1289350 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1368846 1578022 ~ 1579356 (+)
G229936 NA other upstream 1543785 1397080 ~ 1407130 (+)
G230689 NA other downstream 110842 3078502 ~ 3087392 (+)
CI01000054_03848427_03914231 NA other downstream 940791 3848427 ~ 3914231 (+)
G231863 NA other downstream 1439492 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2655355 5608457 ~ 5634804 (+)
G232558 NA other downstream 3026000 5993660 ~ 6041863 (+)

Expression


Co-expression Network