CI01000054_03016199_03016501


Basic Information

Item Value
gene id CI01000054_03016199_03016501
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3015959 ~ 3016693 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_03016199_03016501.mRNA
TCATAAAAAGCAGTCCATATTGCTCATGCATATTGGTTCAACGTCAAGACCAATGACAACATTTGACGTTACGTGTATTTTTTTGGGTGAGAAATTCCCTTTAAATAGCTAAGAAGAGATAACAAGAATTCATAAATGACAAATAAATGGAAGATGACAAATGAGTCGATATGAAAATAAGACAACAGCATAACAAGCATCAATATTTTAGAATAGCGACCAAGAAAATAATATACATCAATGGGAGATGTTTGTTGCCCAGGCACAGCGGTTGAATTCAGATATCGTCGAGTTGGTCCTGTGAGATCGTCCGGAGAAAAATGCTCACTGCACACCCTCAATGCGCGGATAGATTCGACGGGTGAGTTAATATCCCGTTTGAGAGCGAGCAGCCACAGCTTCAGTCTCTCTGGATCGTGCAGCGGCAATGTGTGGAAAGTCAAACTTTCCTCCTGTGATGATGCCGTTGGACGGAGTCTTATTGCTTTCTCTCGGTTAAAACATCCAGGAAAAGCACACACGCGTACCATCGCGGGTTTTTAGTAACATAGCCTATGTTTCGTTTAGACCTATTCCTTTTACAGGCTATAATTTAGTCTGTTCTTCTCCGTTCACAGAAGTACAGCAGGTGCGATGTGACCATGAACAGGCTACCATGGTATTTTTAATAGGTCACAGACACATCCCTTCAGATTTAATTTAATAAGCCTACCATTTGCATAATATTGTGTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_03016199_03016501.mRNA True 735 mRNA 0.41 1 3015959 3016693

Neighbor

gene id symbol gene type direction distance location
CI01000054_02975008_02985278 EFCAB1 coding upstream 30624 2974588 ~ 2985335 (+)
CI01000054_02951289_02967370 NA coding upstream 48299 2950915 ~ 2967660 (+)
CI01000054_02824071_02824355 NA coding upstream 191317 2824025 ~ 2824642 (+)
CI01000054_02652696_02685815 CALCR coding upstream 330126 2652696 ~ 2685833 (+)
CI01000054_02613166_02614884 TFPI2 coding upstream 400501 2613058 ~ 2615458 (+)
CI01000054_03424472_03425704 NA coding downstream 406361 3423054 ~ 3426433 (+)
CI01000054_03558982_03663042 ADGRB2 coding downstream 542289 3558982 ~ 3663042 (+)
CI01000054_03670684_03671857 NA coding downstream 653991 3670684 ~ 3672003 (+)
CI01000054_03707961_03761024 ADGRB2 coding downstream 691142 3707835 ~ 3761112 (+)
CI01000054_03848427_03914231 NA coding downstream 831734 3848427 ~ 3914231 (+)
G230700 NA non-coding upstream 12842 3001195 ~ 3003117 (+)
G230697 NA non-coding upstream 15940 2989009 ~ 3000019 (+)
G230705 NA non-coding upstream 51950 2933908 ~ 2964009 (+)
G230695 NA non-coding upstream 102383 2910956 ~ 2913576 (+)
G230693 NA non-coding upstream 149319 2864597 ~ 2866640 (+)
G230856 NA non-coding downstream 40171 3056864 ~ 3057219 (+)
G231015 NA non-coding downstream 122700 3139393 ~ 3139663 (+)
G231209 NA non-coding downstream 342578 3359271 ~ 3359533 (+)
G231270 NA non-coding downstream 388524 3405217 ~ 3405519 (+)
G231273 NA non-coding downstream 393906 3410599 ~ 3410925 (+)
CI01000054_02289802_02330591 SLC25A13 other upstream 711577 2289802 ~ 2330981 (+)
CI01000054_01725792_01726688 NA other upstream 1289166 1725627 ~ 1726793 (+)
CI01000054_01650242_01665628 PLEKHO1A other upstream 1354394 1650242 ~ 1666115 (+)
CI01000054_01578022_01579167 NA other upstream 1433890 1578022 ~ 1579356 (+)
G229936 NA other upstream 1608829 1397080 ~ 1407130 (+)
G230689 NA other downstream 61809 3078502 ~ 3087392 (+)
G231863 NA other downstream 1390459 4407152 ~ 4450730 (+)
CI01000054_05608892_05634793 RNF19B other downstream 2606322 5608457 ~ 5634804 (+)
G232558 NA other downstream 2976967 5993660 ~ 6041863 (+)

Expression


Co-expression Network