CI01000054_03049995_03054032


Basic Information

Item Value
gene id CI01000054_03049995_03054032
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3049864 ~ 3054032 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_03049995_03054032.mRNA
ATGGCCAGTGAGGATTTCACAGGACATCTCACTGGAGATGCAGCTGTTTCAGAAGAGAAGCCAGATGCAGTGGAGTTATGCAAGCTGGACGCCACTGAACCAGGTGTAAACGAGCCAAACCCTCAAAACAGCCTGATGGAGGGCCATCAGATGGAGCTGGAGGAAGTAGAGATGCACCAAGAGGAGATGGAGGAAGATCTGGATTTAGGACAACAACCAGATGTGGACCAAGGAAACAGTCCAGAAAAGGGCAGTCCATCCGACCAGGGTGAAGAAGAAGAGAACTGTGTACAGGAACACTGTGAACAGAAGGACGCTACAAAACTAGAGAAGAGCGAAGGCAAGAGCAACACAGAGGACACGGCACACAGTTCAGAGGAGCTTGTGATTGCTAAAGTTGAAGACCTCACAAATGAAATGGCAATAGATGTGGACCAGACTGAGGTTCGTGATGGGAAGATGGAGGTAGATAGACCAGGAGATGCAGGAAAATTGTTGGCTAAACCCATAAAAAAGGAGAAAACTGAACCATCTGCCATGCAAACACATCCAGTGTTAAAAACTGAATTGAAACCACAAGTGGCCCAGCCTTCCATCGCCGTTCCAGTGAAGGTGAAGGATGAGCCAATGGATGAGGAGTATGAGAAGGCGTCGGCAACTCTAGAAAACATTAAAGATGAGCCTGACACCGCAGCTGAGTTTAACCAGACACCTGATGCAATCAAGATCAGCGCAGTGTTCTCTGTAGGAGGAAATGCCACATCCATCGCTCCAGCAGTCGTTCCAGCAAAGGCGGCACCAGTCCCTACACTATCCCTTCGTCCTCTGGCCCCTGCCAATCCAATTGGTGTGGTCTGCACAGGATGTAACAAAGTCCTGCTAAAGGGACAGACGGCGTTCCAGCGGAAAGGCTGTCCCAAACTCTACTGCTCACCTCAGTGTCTCTGTAGCACCTCTACTATGGTGGTCAAGATACCTCAGAAGAAACAATGTTACCACTGCCTCAAAGACATTCTTGACCCAAAAGATGTGGTCAATGCGCCAGTGGACATGTCAGGGACTTTGAAGGAGTTCTGCAGTCAGAAATGCCTCAGCGCTTTAAACTTCAAGTGCAGTGTGTGTCAGAAGGCAGGAATGAATGACACAAACATTTACATTTTATCATTGACAGATTTTTTTGCTTTTGCTTTTCTATCGCACCCCAAGTATTTAATTTCAGTCATATTTGACTCAAAATTCAGCAAGCGCTGTTTTGTCTAGGGCTGCACAATATTGGAAAAAACTGACATTGCGATATTTAGTTTTTCTGCGATTATGTATTTCGATATGAAAACAATTTCACCGGATGAGAGTGAATGATAGGGGAGTGAATCTGCATAGAAAATAATAAA

Function

NR:

description
Si:ch211-173p18.1 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_03049995_03054032.mRNA True 1391 mRNA 0.46 7 3049864 3054032

Neighbor

gene id symbol gene type direction distance location
CI01000054_03032517_03047094 ZMYM4 coding downstream 2770 3031826 ~ 3047094 (-)
CI01000054_03018229_03030984 NA coding downstream 18880 3018076 ~ 3030984 (-)
CI01000054_02999099_03015534 NA coding downstream 34330 2998780 ~ 3015534 (-)
CI01000054_02985381_02988122 NA coding downstream 61703 2985360 ~ 2988161 (-)
CI01000054_02868603_02911589 CDK6 coding downstream 138059 2868444 ~ 2911805 (-)
CI01000054_03082593_03087260 SFPQ coding upstream 28316 3082348 ~ 3087545 (-)
CI01000054_03485424_03500327 NA coding upstream 430796 3484828 ~ 3500489 (-)
CI01000054_03918853_03925416 NA coding upstream 864366 3918398 ~ 3925416 (-)
CI01000054_03964701_03964965 NA coding upstream 910658 3964690 ~ 3964965 (-)
CI01000054_03998494_04025965 NA coding upstream 944386 3998418 ~ 4026082 (-)
G230910 NA non-coding downstream 6020 2950781 ~ 3043844 (-)
G230922 NA non-coding downstream 70410 2918027 ~ 2979454 (-)
G231001 NA non-coding downstream 132067 2917235 ~ 2917797 (-)
G230913 NA non-coding downstream 183224 2863400 ~ 2866640 (-)
G230999 NA non-coding downstream 353904 2695624 ~ 2695960 (-)
G231003 NA non-coding upstream 2696 3056728 ~ 3056940 (-)
G231004 NA non-coding upstream 35952 3089984 ~ 3090270 (-)
G231010 NA non-coding upstream 62143 3116175 ~ 3116434 (-)
G231016 NA non-coding upstream 85288 3139320 ~ 3139613 (-)
G231096 NA non-coding upstream 158024 3212056 ~ 3258021 (-)
CI01000054_02857402_02860451 NA other downstream 189291 2857402 ~ 2860573 (-)
G230923 NA other downstream 212182 2837237 ~ 2837682 (-)
G230178 NA other downstream 1819729 1185533 ~ 1230135 (-)
G230908 NA other upstream 3616 3057648 ~ 3063343 (-)
G231645 NA other upstream 927815 3981847 ~ 3982823 (-)
CI01000054_04671351_04681181 PEF1 other upstream 1616119 4670151 ~ 4681361 (-)
G232274 NA other upstream 2152167 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 3574050 6628082 ~ 6642160 (-)

Expression


Co-expression Network