CI01000054_05685529_05686880


Basic Information

Item Value
gene id CI01000054_05685529_05686880
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 5685500 ~ 5687414 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_05685529_05686880.mRNA
ACTATGGTGTCTGAATTCTGAATTGACATCACTTTATCCAATTCAGACAACATATAAAATACATGATGAAATTATGCATAACATTACAATTTCGTCCTTGACAGACCTTTTGACTTTCACTTACTGAAATATTGCTACAGGTCTGTGCATTTTTTTCTCTCACTTTTAGTCCTCAAATAAGAACCACACTGTAAAAAATAATTGTTGGTTTAACTTAAAAAAGTAAGTCACCTGGTTGCCTTAAAATTTTGAGTTAATACAATGAAGGAGATTGGTTTAATCAACAGAAATTCAAAATAGTATGTTTTCTGTACCACATTAATTATCTAAGTTGATTTGACAAAAGAAAAAAACGTTGTGATAAATCATGAAAATATTTTTTTTGCAGCGCAGGATCCTCTGAAGCTAACAATCAGAGTGCTGGAGATCACTAGATACTTATTCACCAAAACACAGTTAAAAGGCACATAAAGCAGCACACACTTCAATACAGCAACATGATCTCTCTGACCTGCAGAAACACACAAAGGTCAAATGAATGCTAATAAGACGACAGCAGTAAATGACATGGAAAGCCAAGATCATAAGATCACGGGTGTTCCTGAAGGTCCGGTTCAAATGCTACTAGAAAGACAGAAGAAACACAATGAAGTCTGTTTACACAGTGCACAGCTACAGGACAAACAGAATGTGACACATGACTCACAGTTCACTGTAATACTAAGAAACGATGATAGGGGGCAGTGTGGTAACAGTCAAGCATGTGAAGACACATGGCCCAACTCTCTCATTATTAAGCCAAAGGCTGCACTGCCACTTCTAATGCCAACAACAGTCACACAACATCAACTGGTCTCAGATCTGTTACTTTTCACCCGGCTGAAAATGACGACAGATGTCAGTAATCTGCCAAACATTGCACAGGTGAAGCAACACAGAAACTCGTGTGAAATCATCATGAAACTGCAGAACTTTGAAGGAACAGGGAAAAACCACAAGAGTATTCATCTGGAATTTAAAGAGATAAGCCTAATTAACGCACTTAAAACTTCCACAAACACCAACCAAATAAACACAGTATAGGATTTCAAACCCTTTTTATTCCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_05685529_05686880.mRNA True 1112 mRNA 0.37 2 5685500 5687414

Neighbor

gene id symbol gene type direction distance location
CI01000054_05341497_05372926 ANGPT2B coding downstream 312574 5341110 ~ 5372926 (-)
CI01000054_05292456_05317677 NA coding downstream 366509 5292299 ~ 5318991 (-)
CI01000054_04671351_04681181 PEF1 coding downstream 1004139 4670151 ~ 4681361 (-)
CI01000054_04463229_04486856 DLGAP3 coding downstream 1198644 4462888 ~ 4486856 (-)
CI01000054_04411682_04448848 NA coding downstream 1236652 4411429 ~ 4448848 (-)
CI01000054_05711250_05711861 NA coding upstream 23208 5710622 ~ 5712639 (-)
CI01000054_05822181_05823458 ZN706, ZNF706, ZFP706 coding upstream 134754 5822146 ~ 5823684 (-)
CI01000054_05827691_05828736 WDYHV1 coding upstream 139979 5827393 ~ 5830717 (-)
CI01000054_05853193_05858118 WISP1A coding upstream 165661 5853075 ~ 5858118 (-)
CI01000054_05956278_05957354 FAM206A coding upstream 268699 5956113 ~ 5957354 (-)
G233356 NA non-coding downstream 211108 5474145 ~ 5474392 (-)
G232439 NA non-coding downstream 270958 5414224 ~ 5414542 (-)
G232437 NA non-coding downstream 273385 5411567 ~ 5412115 (-)
G232432 NA non-coding downstream 276178 5404061 ~ 5409322 (-)
G232406 NA non-coding downstream 326492 5357436 ~ 5359008 (-)
G233420 NA non-coding upstream 62932 5750346 ~ 5751278 (-)
G233392 NA non-coding upstream 72885 5760299 ~ 5852707 (-)
CI01000054_06283619_06286512 NA non-coding upstream 593130 6280544 ~ 6286767 (-)
G233539 NA non-coding upstream 629907 6317321 ~ 6325541 (-)
G232274 NA other downstream 476260 5206199 ~ 5209240 (-)
G231645 NA other downstream 1702677 3981847 ~ 3982823 (-)
G230908 NA other downstream 2622157 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 2824927 2857402 ~ 2860573 (-)
CI01000054_06629482_06641861 TRIQK other upstream 940668 6628082 ~ 6642160 (-)
CI01000054_07165957_07169539 HEYL other upstream 1478021 7165435 ~ 7169539 (-)
G235216 NA other upstream 3560625 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 3795733 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 4175907 9863321 ~ 9867212 (-)

Expression


Co-expression Network