Item | Value |
---|---|
gene id | CI01000054_05825039_05827325 |
gene name | PSMA2, PSA2 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000054 |
NCBI id | null |
chromosome length | 13006764 |
location | 5823806 ~ 5827378 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
psma2 | Involved in response to virus. Located in extracellular exosome and nucleus. Part of proteasome complex. |
id | name | namespace |
---|---|---|
GO:0004175 | endopeptidase activity | molecular_function |
id | description |
---|---|
K02726 | PSMA2; 20S proteasome subunit alpha 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000054_05825039_05827325.mRNA | True | 1991 | mRNA | 0.38 | 8 | 5823806 | 5827378 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000054_05813838_05819498 | BMP8A | coding | upstream | 4066 | 5812764 ~ 5819740 (+) |
CI01000054_05772612_05808901 | MACF1, MACF1A | coding | upstream | 14440 | 5772452 ~ 5809366 (+) |
CI01000054_05713420_05771550 | MACF1, MACF1A | coding | upstream | 52061 | 5713420 ~ 5771745 (+) |
CI01000054_05696772_05708538 | NA | coding | upstream | 115169 | 5696093 ~ 5708637 (+) |
CI01000054_05642130_05679022 | NA | coding | upstream | 144322 | 5641126 ~ 5682561 (+) |
CI01000054_05830867_05831873 | NA | coding | downstream | 3431 | 5830809 ~ 5831953 (+) |
CI01000054_05841632_05851621 | NDRG1A | coding | downstream | 14118 | 5841496 ~ 5852527 (+) |
CI01000054_05875546_05877938 | SLA1 | coding | downstream | 48101 | 5875479 ~ 5878322 (+) |
CI01000054_05926683_05953807 | CTNNAL1 | coding | downstream | 99305 | 5926683 ~ 5953955 (+) |
CI01000054_05957906_05981499 | ELP2 | coding | downstream | 130021 | 5957399 ~ 5982222 (+) |
G232499 | NA | non-coding | upstream | 141245 | 5627572 ~ 5627795 (+) |
G232467 | NA | non-coding | upstream | 349473 | 5474045 ~ 5474333 (+) |
G232443 | NA | non-coding | upstream | 404937 | 5418632 ~ 5418869 (+) |
G232379 | NA | non-coding | upstream | 422694 | 5400368 ~ 5401112 (+) |
G232519 | NA | non-coding | downstream | 10905 | 5838283 ~ 5838874 (+) |
G232521 | NA | non-coding | downstream | 32242 | 5859620 ~ 5859877 (+) |
G232526 | NA | non-coding | downstream | 39489 | 5866867 ~ 5867089 (+) |
G232530 | NA | non-coding | downstream | 42820 | 5870198 ~ 5870423 (+) |
G232532 | NA | non-coding | downstream | 44995 | 5872373 ~ 5872855 (+) |
CI01000054_05608892_05634793 | RNF19B | other | upstream | 199131 | 5608457 ~ 5634804 (+) |
G231863 | NA | other | upstream | 1373076 | 4407152 ~ 4450730 (+) |
CI01000054_03848427_03914231 | NA | other | upstream | 1910260 | 3848427 ~ 3914231 (+) |
G230689 | NA | other | upstream | 2736414 | 3078502 ~ 3087392 (+) |
CI01000054_02289802_02330591 | SLC25A13 | other | upstream | 3519424 | 2289802 ~ 2330981 (+) |
G232558 | NA | other | downstream | 166282 | 5993660 ~ 6041863 (+) |
CI01000054_06305908_06312122 | NA | other | downstream | 476929 | 6305908 ~ 6312163 (+) |
G232659 | NA | other | downstream | 547472 | 6374850 ~ 6375894 (+) |
G232870 | NA | other | downstream | 1060534 | 6887912 ~ 6888503 (+) |
G233024 | NA | other | downstream | 1740145 | 7567523 ~ 7609893 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
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