CI01000054_06629482_06641861 (TRIQK)


Basic Information

Item Value
gene id CI01000054_06629482_06641861
gene name TRIQK
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6628082 ~ 6642160 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_06629482_06641861.mRNA
ATATAATAGTAAGATAGAATCTTGTTCTTCTGACAATAAAGGCTGACACAGGCTGCACTTTTCAAGATTTATTTAATGATTGGGAAAAGAGAAAATACTGTCTGTACCTCTGTGAGTATTTAATTTTAATGATCTATTTTGGGATACTACCTGTTAAATTTCATTTAAAATTATCCAAACATAAAATCTTTCATAGATGTATATTACAAAAGAAAGCTTGCCTGATAATTTGGCAAACAGTAATCGTTGCTAAGATAGGACCGGTCAGTAATGTTTTTTAATGCAGGACTTTTGCATGGATGATTGGCATTAATGCCCTGCAGTCCCGTCCCACGGAGACCGAACTGAGAACTATTCCAGAAGTCTCTGCAAACAAAAACAGTGTTCATTATTTAACAGCTCAGTCTGTGAACCAAGCTCCATCTCCCATCATTCAGCACAGGAACAAAATAGCAGGATGTTTACCTCTGATAATGGCCTCTTCCAGGCCCGTGTCGCACACAGAAGAGACACGACGCTCCTCGCACACCTTGCACACATACACTCCAGGTGGCCGCTTTGCCTGGCGGGTTCGTTGCAGAAAACAGGATTACAAGAAAACCAAGCCGGCGCTGCGAGCCACTCGGCTGAAGGCGGAGGCGAAGAGGAGTGCTCCGGGAATCAGGGACATCATACTGGTCATTGTGGCTGTTCTGGTCTTCCTGCTAGGAGTCTATGCATTCTTCTACCTCAATCTGAGCACCGAGCTGGATCTGGATGTGGACATGGACTGAAGGACTTTTGCCATCTGGACCCATGAGCCATTCATGAAGTGCCAGCAGTTTCATAGTGTTATACATTTCCTTTAATTGTCCCCTTCTATGCCTTTTAAACCAGCAGAAACTGCGTGAAAGGAATGAAGATGAGTCTTAAAGCGCATAAAAGCATGAAGTTAAAATCTACAAATTAAA

Function

symbol description
triqk Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Orthologous to human TRIQK (triple QxxK/R motif containing).

NR:

description
triqk

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_06629482_06641861.mRNA False 950 mRNA 0.43 4 6629305 6642160

Neighbor

gene id symbol gene type direction distance location
CI01000054_06503408_06508723 NA coding downstream 119237 6503233 ~ 6510068 (-)
CI01000054_06469564_06492881 RUNX1T1 coding downstream 136424 6468852 ~ 6492881 (-)
CI01000054_06422150_06433402 PEX1 coding downstream 195616 6421808 ~ 6433689 (-)
CI01000054_06321499_06337371 NA coding downstream 291538 6321269 ~ 6337767 (-)
CI01000054_06283619_06286512 NA coding downstream 342629 6280544 ~ 6286767 (-)
CI01000054_06830485_06831336 FAM84B coding upstream 186832 6828992 ~ 6831336 (-)
CI01000054_06835747_06861855 FAM91A1 coding upstream 192260 6834420 ~ 6863079 (-)
CI01000054_06874039_06875193 NA coding upstream 231160 6873320 ~ 6875309 (-)
CI01000054_06895032_06942103 SPIRE1A coding upstream 252668 6894828 ~ 6942362 (-)
CI01000054_06946694_06947533 NA coding upstream 303222 6944557 ~ 6947680 (-)
G233687 NA non-coding downstream 3399 6625788 ~ 6625906 (-)
G233689 NA non-coding downstream 4201 6624821 ~ 6625104 (-)
G233685 NA non-coding downstream 9406 6619674 ~ 6619899 (-)
G233678 NA non-coding downstream 20441 6608508 ~ 6608864 (-)
G233677 NA non-coding downstream 21222 6607832 ~ 6608083 (-)
G233694 NA non-coding upstream 18380 6660540 ~ 6660745 (-)
G233704 NA non-coding upstream 29192 6671352 ~ 6671552 (-)
G233709 NA non-coding upstream 39319 6681479 ~ 6681940 (-)
G233712 NA non-coding upstream 41692 6683852 ~ 6684871 (-)
G233747 NA non-coding upstream 92968 6735128 ~ 6735376 (-)
G232274 NA other downstream 1420065 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 1957072 4670151 ~ 4681361 (-)
G231645 NA other downstream 2646482 3981847 ~ 3982823 (-)
G230908 NA other downstream 3565962 3057648 ~ 3063343 (-)
CI01000054_02857402_02860451 NA other downstream 3768732 2857402 ~ 2860573 (-)
CI01000054_07165957_07169539 HEYL other upstream 523275 7165435 ~ 7169539 (-)
G235216 NA other upstream 2605879 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 2840987 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 3221161 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 4161711 10816015 ~ 10819362 (-)

Expression


Co-expression Network