CI01000054_06830485_06831336 (FAM84B)


Basic Information

Item Value
gene id CI01000054_06830485_06831336
gene name FAM84B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 6828992 ~ 6831336 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_06830485_06831336.mRNA
GTGGAGCTCATTTCACTCCATCTGTCCGCTGCTGAAGTGGCATATATGGGCAACCAGGTTGACAAACTGTCACACCTAAGTTACGCCGAAGTTCCCACGACCGACCCTAACGGACTGGACACGGAGGAAGACGGCCCGCGGATCGGGGTCTCGTACATATTCGCGACCGACGACGACGAACTGGATGATAATCAACATCAGCATGTCGATGGAACGGAGCAGAAGGAGGAAGAGAAGCACTACAACGAGCTTGACTGCGCGGTTTACCACCGAGACGAGTGCATTTATGAGAAGAGTAACACAAGGGAACTGGAGACGTTCAGCCCGGAGAATTTACTGAACAAATGTAAGCCCGGAGACCTTCTGGAGTTCGTGTCCGCCGGCCAGTACCCGCACTGGGCTGTGTACGTCGGGGACTTCCAGGTGGTGCACCTTCACCGGGCGGAGGTCAAGAACAGTTTTCTGACTGATGCTAGTCAGGGCAGGAGGGGCAGGATTGTAAATGAGCTGTACAAATTCAAACCCCTGAGTCCTGACATGGTGGTGCAGAACGCTATGGAGCAGGTGGGTGCGAAAGACAGAGAATTAAGTTGGAGAAATTCGGAGTGTTTCGCCGCTTGGTGCAAATTCGGTAAACGGGAGTTCAAGATGGGAGTGGAGATACGGATAGGAAAACAGCCGTACAGATTAAAGCTCCTCTTGCCTGACAAACAGTTTCATGTGCTGGAGTTTCAGAGTTTGGAGGATTTGATCATGGAAAAGAGGAGAAATGATCAGATCGGTAAAGCGGCTGTTATACAGGAGTTGGCCCATCATTTAAGCAATAGCGGAAGTGAAGCAAACGTTCATTGACATGCAACAGGTAGCCGAGAGAAATTCATCCCAAAATAACATATGCGTGATTCTCATCAAACCCATCCAGATCAAAAAAATGTATGAGAAGTATTTTTTGGCTTAAAGAACTGTTTTAAGAACACAGATTGTGATTGGTCAGGACAGCGCTCCAGTGATACAGTAGCTCTTCATCATATCACTGCGCCGCTCCCATTGATGTTCTGTCACGTAAGGGACTATATCTTCTAGCGGAAGGATGTCACTTAAATAATTTGACCTTTAAATAAAAAATGTCTTATTAATATATTTAATTAACTTTTTTTTTCTTTAACAGTAAAGCACTAGGCCGTGCTGCACTGTGAATGGCTAAATGGATAATCTGTAGTGTCCCTAAATTGACAATACATAGCACAGGTTTGCGAGCTTTATTGGACAAGATGTTTTGCTTTGTGACGTATTGTGATGCATTCTTTTCGTGCCAATTAAGCACATTTTCTCCTCAAATTCTCACTGGTGTAATGCAAAAATGCATTCTTTGACAGACTCATATTAGCGTAATGTGATAAAACGATGTTGATTTTATTAAAATTAAATTAAATGAAAATAATGGAGCTTAAAAGTAAAGCAGGCTGAATTGTGGTAATGAGAATTGGGGGGTTAAACTTGCTGAATTGTCTTAAAAATAATGTTACAATGCAAAACATTGTAATGTTCCCAAATTCTTCATTTACTTTCAGACAAAAATGTTTTTTTCTTAATTTTGGGGCTTCGTAAGATTCATGACATTACTTATGACAAATTATGTTAGAAAATTTCACAATCAGTTATTAAGTATTTCAAGTCAGATGGTATTGTTTTTCAAGTGGCTCTCAAGTTGTAAGCTGTTCTTTATAATGTATAATCAGGCTCTCTGTGAGTTGCAAAATAGCCATAAATCATCATATGTGGACCTTGCTTTCTAAAAGTTTTGGCACAGATGAAATTGCCGCAAGTAAACAATGACTAAATCCACCTATTTACCTTCTCTCTCAGTTATTCCTGTTTTTCTCATTACACATGACCTCACTAGCTCTTTAGTGAGGTCAGTATGGTGCATTTCTTCAGTAAATGAACATTTATTTTCCCTTTGACATTATTATACAGGTCACATTTTTCCATCTGTTTACATTTTTGGACTTTTTTTTTTATTGCCAGAAGCCACTTACTGGTAATATGGTGGAGTTGGAAGGCTGCAGGTGTAAACAAGAGCTTGTTTTTAAAAAATCTGATAGAAATCATTTGATGTAGTGTTTTAATATTCAGCAAATGCTTTAATCCTGAGCCTCTTCAATACCCTGCAAACTCTCCATGACTTTCATTTGCAAGGCTGCCAAAGTTGGCTTACCTTCTAATTGTCCTCCCACTTGTGAAGTTTAATACAATTTTTTTCTGAGTGTGTGAACTGAATTGATGATGTGAGGCTGTAGTAAAGAAGCTGAAAGCAACAGTTTGCTAAGGCTGGGCTAAATAAA

Function

symbol description
fam84b protein FAM84B

GO:

id name namespace
GO:0003674 molecular_function molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_06830485_06831336.mRNA True 2345 mRNA 0.41 1 6828992 6831336

Neighbor

gene id symbol gene type direction distance location
CI01000054_06629482_06641861 TRIQK coding downstream 186832 6628082 ~ 6642160 (-)
CI01000054_06503408_06508723 NA coding downstream 318924 6503233 ~ 6510068 (-)
CI01000054_06469564_06492881 RUNX1T1 coding downstream 336111 6468852 ~ 6492881 (-)
CI01000054_06422150_06433402 PEX1 coding downstream 395303 6421808 ~ 6433689 (-)
CI01000054_06321499_06337371 NA coding downstream 491225 6321269 ~ 6337767 (-)
CI01000054_06835747_06861855 FAM91A1 coding upstream 3084 6834420 ~ 6863079 (-)
CI01000054_06874039_06875193 NA coding upstream 41984 6873320 ~ 6875309 (-)
CI01000054_06895032_06942103 SPIRE1A coding upstream 63492 6894828 ~ 6942362 (-)
CI01000054_06946694_06947533 NA coding upstream 114046 6944557 ~ 6947680 (-)
CI01000054_06951426_06955263 ATP6V1C1, ATP6V1C1B, ATP6V1C1A coding upstream 120090 6951426 ~ 6955263 (-)
G233770 NA non-coding downstream 50681 6778112 ~ 6778311 (-)
G233747 NA non-coding downstream 93616 6735128 ~ 6735376 (-)
G233712 NA non-coding downstream 144121 6683852 ~ 6684871 (-)
G233709 NA non-coding downstream 147052 6681479 ~ 6681940 (-)
G233704 NA non-coding downstream 157440 6671352 ~ 6671552 (-)
G233791 NA non-coding upstream 34049 6865385 ~ 6865511 (-)
G233799 NA non-coding upstream 52972 6884308 ~ 6884514 (-)
G233803 NA non-coding upstream 57372 6888708 ~ 6889021 (-)
G233627 NA non-coding upstream 129037 6960373 ~ 6963408 (-)
G232274 NA other downstream 1619752 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 2156759 4670151 ~ 4681361 (-)
G231645 NA other downstream 2846169 3981847 ~ 3982823 (-)
G230908 NA other downstream 3765649 3057648 ~ 3063343 (-)
CI01000054_07165957_07169539 HEYL other upstream 334099 7165435 ~ 7169539 (-)
G235216 NA other upstream 2416703 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 2651811 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 3031985 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3972535 10816015 ~ 10819362 (-)

Expression


Co-expression Network