XLOC_009870


Basic Information

Item Value
gene id XLOC_009870
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 22327970 ~ 22329028 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021925
CCGCACTCAACGGGTGCAGTTTTGCTCATTTGCGGGGCTATACGGCGATTgcgtttaattattaattttggaTTATAAAAGCACAATTCTCCTAGGAGAATGAGTATGCTGcttcctgatggtgaatgcggttatactgattgcaggtattatttggtagtttgatcatttgtttaactaatttggcaaccgtcaaacatcatctaGTAAACAGTTAGTAAATAAACGTTAGTGTtctatttgggacgacactacatttatATGCTATGCTGTGGAGTGTGTAAGTGCGTAAGTACATAGTGTATAAGTTCATAGTATATAATAcaccatttgggatgcagcttttgtctttttttaggtTGGAGTGGAACAGAAGGAGACTCACAAGGGGAATGTGAGAGATATACATGAGGACCTGGAGCTCAGGAAGCAGGTAGAATTGCTTGAACAGACTGAACAATGGAGTTAGTTTCCAAAGAAATGTATTAAGATGAATTAAAAGCTTGACATCTTTCTCTTTGGCAGAGTCTGTGTCAGGTTTTTTTCAGGTGATGGAGAGAGAGCAGGCAGAtgagggagactcacaagagcattgATGGACATTTAACTAAAAAATGCTGGAGAACAGGTAGAGTTCTACTTGAGAAgacactacattcatatactattCCATTGAGCGTGTAAGTGTGTAAGTACATTGTGTATAATGTGTCCATTTGGGTCGCAGCTTTTGTCATTTGCAAgttggagtggagcagaagaagAGAGACTAACAAGGAATATACTTGAGAACCTGGAGCTCAGAAAGCAGATTAGTATGGAGCATGGGGTGAAACAGGGAAATACCTCAATAATGACAAGTACATCATAATAAATTAGGTACTGCCTTACTTTTTTAAGTTATATCAAATGAACTTCAtgaaattctttaaattatatattcacatttttacactgtgataGTGAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021925 True 967 lncRNA 0.38 2 22327970 22329028

Neighbor

gene id symbol gene type direction distance location
XLOC_009869 NA coding upstream 468 22323766 ~ 22327502 (+)
XLOC_009868 NA coding upstream 214034 22022291 ~ 22113936 (+)
XLOC_009867 znf687a coding upstream 389926 21917673 ~ 21938044 (+)
XLOC_009866 NA coding upstream 450549 21874395 ~ 21877421 (+)
XLOC_009865 zmp:0000000608 coding upstream 460098 21867161 ~ 21867872 (+)
XLOC_009871 C16H1orf43 coding downstream 16485 22345513 ~ 22361219 (+)
XLOC_009872 NA coding downstream 246115 22575143 ~ 22579326 (+)
XLOC_009873 she coding downstream 258633 22587661 ~ 22603354 (+)
XLOC_009874 chrnb2 coding downstream 289592 22618620 ~ 22678294 (+)
XLOC_009875 NA coding downstream 366198 22695226 ~ 22696496 (+)
XLOC_009862 NA non-coding upstream 693134 21634387 ~ 21634836 (+)
XLOC_009859 NA non-coding upstream 1185454 21141048 ~ 21142516 (+)
XLOC_009889 CR533578.1 non-coding downstream 1278203 23607231 ~ 23607352 (+)
XLOC_009902 NA non-coding downstream 1690080 24019108 ~ 24028618 (+)
XLOC_009903 NA non-coding downstream 1869451 24198479 ~ 24207903 (+)

Expression


Co-expression Network