CI01000054_07011099_07011947


Basic Information

Item Value
gene id CI01000054_07011099_07011947
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7011023 ~ 7012098 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07011099_07011947.mRNA
GTAAAAATGGGTGTGTAGATAAAGTTTTATTGTCGACACTAGAAACCTTGCTCTCTTGATAAGTTCGATTAACGTGATGGCGGTGGTGGTTGACAAATATATCTTGACCGAGGCGCTCTCTGCCATTCTGGGAGTCACTGTGAAATTGCAGTCAGACTGTAAGGATTTAAATGGAGCCATTCAACTGCATATTACCAGTCTTACAACTCTGGCCCTTCTTGGTTATGATGCGTTCATGCTTGTGGTCCAGCCTGTGAGTTATATAACTTCTTTACTGACGGGGTGGTTTATTGGTGATCAGAAAAATTCCCAAGAAACCCCGAAAAACGAAAGCGCGAGCTCTTCTCTCCGGAAGGAATTATTTGTGATCCCAGATGACTTTTTCGACGAAAAGTTTGACTTTGACTTCACAAACATGTCCGAGTCAAAGTCTGATGAGTGCATGCGCGGGAACGAGCCGTACAAGCGCCCCTACGGGTGGATGCGCTTCGCGCTGAAGGTGCGGGACAAATACCCGGACGGGAACGCTTGGCTGGGAACAGGTGGATGGAGGAGCCGTTCCGCGCCCGGTGAGTGGCCAGTCTCCTACCACGGAACCGGTTTACAGGGGGCTGAGGCCATCATACAATCTCATTTCAAGGCGGGAGACCGTCAGGCTTACGGAAGAGGGATTTATTCATCCCCAGACATCAACGTGGCAGATGGCTACGCGACAAGCAAGAAATTCACCTCGCAAAAGAATGGAAAGACTTACAAAGTTATCATGCAGAACAGAATCAACCCCAAGAAGAGGGAAATCATCAAGGGGAAGAACTTTTGGTTGGTCCGTATTCCTGAAGGAACATCAGCTGAGAAAGAGAAAGAAATAGTGGAGAGTTCAATCCGCCCTTATGGCCTCTTGCTTAAAGAGGTGGAAGGTAAATAAAGTGGCTCTCAGAATTGAGCTTTACTCTGTCTCTTGGTCATACATTTGTACATTCAAATCTTCTGACTTTTGGTTAAAGAGATGTTTATTATCATATGAGATAGGCCTATTGTATTTTTCTCTCAAATAGACATGGAATTGGATAGCTGAA

Function

NR:

description
hypothetical protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07011099_07011947.mRNA True 1076 mRNA 0.46 1 7011023 7012098

Neighbor

gene id symbol gene type direction distance location
CI01000054_06990478_06999311 LAPTM4B coding upstream 11712 6990405 ~ 6999311 (+)
CI01000054_06974533_06985526 MTDHA coding upstream 23986 6973352 ~ 6987037 (+)
CI01000054_06967494_06972758 RRM2B coding upstream 38147 6967014 ~ 6972876 (+)
CI01000054_06962442_06966056 AZIN1B coding upstream 44785 6962333 ~ 6966238 (+)
CI01000054_06865381_06869404 KLHL38A, KLHL38 coding upstream 141081 6865381 ~ 6869942 (+)
CI01000054_07019424_07021726 NA coding downstream 7326 7019424 ~ 7022311 (+)
CI01000054_07040367_07056299 5NT1A, NT5C1AA coding downstream 28269 7040367 ~ 7057570 (+)
CI01000054_07119711_07124720 HPCA.S, HPCAL1, HPCA, HPCAL1.L coding downstream 107613 7119711 ~ 7124770 (+)
CI01000054_07145831_07153505 NA coding downstream 133407 7145505 ~ 7154654 (+)
CI01000054_07189617_07192052 ZBTB8B coding downstream 175879 7187977 ~ 7192069 (+)
G232848 NA non-coding upstream 1800 7007111 ~ 7009223 (+)
G232886 NA non-coding upstream 7049 7003611 ~ 7003974 (+)
G232883 NA non-coding upstream 65190 6945630 ~ 6945833 (+)
G232882 NA non-coding upstream 65427 6944556 ~ 6945596 (+)
G232876 NA non-coding upstream 93743 6915946 ~ 6917280 (+)
G232914 NA non-coding downstream 55316 7067414 ~ 7067653 (+)
G232942 NA non-coding downstream 164241 7176339 ~ 7176575 (+)
G232944 NA non-coding downstream 166150 7178248 ~ 7178633 (+)
G232948 NA non-coding downstream 169804 7181902 ~ 7182155 (+)
G232907 NA non-coding downstream 206041 7218139 ~ 7219649 (+)
G232870 NA other upstream 122520 6887912 ~ 6888503 (+)
G232659 NA other upstream 635129 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 704163 6305908 ~ 6312163 (+)
G232558 NA other upstream 969160 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1386348 5608457 ~ 5634804 (+)
G233024 NA other downstream 555425 7567523 ~ 7609893 (+)
G233306 NA other downstream 1292501 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1293839 8325126 ~ 8329716 (+)
G235560 NA other downstream 3376038 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4552878 11564820 ~ 11568999 (+)

Expression


Co-expression Network