XLOC_009871 (C16H1orf43)


Basic Information

Item Value
gene id XLOC_009871
gene name C16H1orf43
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 22345513 ~ 22361219 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019696
AAAACACCCGACGAAGAGACCACAGGCGAGATGTCAACAAAAAAACTCTCCCGAAAATGCCTCTGTCAACCTGAATAAGAACCAGCCTAATTTTACAATTCATCAACAGTAACGAGCAGTAACGTTAGcttctttttattacatttaaaaaaaagccacACAATGGGAACGCATCTTTCGGGAGTAAATGTTGTTCTTGTTATGACCTACGGCTGCCTGGTGTTTGTGCTGCTGTTCATTTTTATGAAAAGGCAGATTATGCGCTTCGCTATGAAGTCTCGCAGAGGACCACATGTCCCGCTGGGTCACAATGCACCAAAGGACCTGAGAGAAGAGATCGATTTGTGTTTGTCTAAAGTGAATGACGTTCGCTATGAACCAAGTCTGCTCTCAAAAGATGACGACCGACTGAGGCATCAGGGCCAAATTGgTTGTTATAATTATCTCTACAGAATGCAAACTTTAGATGCCATCAGAGACTCTGATCTTCCGGTTCTGGACATGTCTCGCAGTGCGAGTGCTCTGACGGGCCGCCAGTACAAGAAGTGGCTGATGGATCTGCGAATCTCTCACTCTCTGGTCAAGTTCAATCATAGTGCACTTCTGGATCGCTTGCTGGAGGGTTATGACAATGCTCGACACGGCACTGGGGTGTTTGGTGAAGCAGAGTTTGTGAAGTATAAACAAGATCTGACTGAACTGGCTGCTCTTGTGAAGAGTCACTCCAACAGCAGCAGTCTGAACCAGCAGCACCAGTCAGCAGCCAAAGACCTGACCAGCTCTCCCGGCCCATCGTCCACCTCCACCATCCAGGTCACCTACCTGCCGTCCAGCGGTCAGCGCAGCAAGAGGCCCAAACACTTTCTAGAGCTCAAGAACTTCAAAGACAACTACAACACACTGGAGAGCACGCTGTAGGACACTGGGTGAGTAAATCTTGACTGAAAAATCATCATCCACACAGTGGGAGATGCTGAAAAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000055613

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019696 True 982 mRNA 0.47 7 22345513 22361219

Neighbor

gene id symbol gene type direction distance location
XLOC_009870 NA coding upstream 16485 22327970 ~ 22329028 (+)
XLOC_009869 NA coding upstream 18011 22323766 ~ 22327502 (+)
XLOC_009868 NA coding upstream 231577 22022291 ~ 22113936 (+)
XLOC_009867 znf687a coding upstream 407469 21917673 ~ 21938044 (+)
XLOC_009866 NA coding upstream 468092 21874395 ~ 21877421 (+)
XLOC_009872 NA coding downstream 213924 22575143 ~ 22579326 (+)
XLOC_009873 she coding downstream 226442 22587661 ~ 22603354 (+)
XLOC_009874 chrnb2 coding downstream 257401 22618620 ~ 22678294 (+)
XLOC_009875 NA coding downstream 334007 22695226 ~ 22696496 (+)
XLOC_009876 CR854942.1 coding downstream 400627 22761846 ~ 22790881 (+)
XLOC_009862 NA non-coding upstream 710677 21634387 ~ 21634836 (+)
XLOC_009889 CR533578.1 non-coding downstream 1246012 23607231 ~ 23607352 (+)
XLOC_009902 NA non-coding downstream 1657889 24019108 ~ 24028618 (+)
XLOC_009903 NA non-coding downstream 1837260 24198479 ~ 24207903 (+)

Expression


Co-expression Network