CI01000054_07019424_07021726


Basic Information

Item Value
gene id CI01000054_07019424_07021726
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7019424 ~ 7022311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07019424_07021726.mRNA
TGTTTCTATGGTGATTTCTTGGAATTTGAGGAAAAACATTTAGGTTATCAGAGGAGGTCCTCCACACCTCAGGGACAAGTAATGAAAACGGTGGTCCTGCAGCAGACAGTGAGACAATTCCAGACCAAACCCAGGCCGATGAATCCCCACAGACATCCAGTGCAGCTCCTGAAGAAATACAGAGCTCTACAGCTGCAGAAGCTCACAGTGAACCAGAAGCGGCTGCTGCTGAGGACATCACGTCTGAACCTGCTGAATCCAACCCCTCCATGACAGCTGAAAATACTGAAGAACCAGCACCAAGTGGTATGCTTTAAATTTTCAGACAACAAGACTAAAGTCACTTTTCTGCTACAAGTCTTCTCAAGATCAAGGTACATTATATCTCGTGTTCTGTGCTTGTGTATGCAAATGGTTTTGGTAGTTTCAAGGGACGTATCTCTAGATGCAAAACACCTTGCACATTCTCTTTCAGCAAAGAGGACTTCCTGAAATACCTTTGTATCATTTTAAAACATTAAAGTACCATTATACCCATTCATACTTAACTTTACACTTCAAGTGAAAGGTGATGGCAGTGGTTTAAATTGGTAATAGTGTGTTTGTTTAACTCTAGTAACCTGACAAGTGTCCTACTAACTGTTCCATGACCAAGGAGTACAATGCTTCCTGCTTAGTTTCCCTTTCCAGCCCTTGTTACCAAAATAAGGGTTTCTATCATACAAATAATCTTCCATCTGATGGTCTGACAAAGGAAAGGAGAACTAAACCTTGAGAAAGACAAGATAGGATTTTGGCTGCTAAAACCAGGTTCCAGTTAGACTGACAGGTTTAATTTTGTGATTATGTGAATATCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07019424_07021726.mRNA True 858 mRNA 0.41 2 7019424 7022311

Neighbor

gene id symbol gene type direction distance location
CI01000054_07011099_07011947 NA coding upstream 7326 7011023 ~ 7012098 (+)
CI01000054_06990478_06999311 LAPTM4B coding upstream 20113 6990405 ~ 6999311 (+)
CI01000054_06974533_06985526 MTDHA coding upstream 32387 6973352 ~ 6987037 (+)
CI01000054_06967494_06972758 RRM2B coding upstream 46548 6967014 ~ 6972876 (+)
CI01000054_06962442_06966056 AZIN1B coding upstream 53186 6962333 ~ 6966238 (+)
CI01000054_07040367_07056299 5NT1A, NT5C1AA coding downstream 18056 7040367 ~ 7057570 (+)
CI01000054_07119711_07124720 HPCA.S, HPCAL1, HPCA, HPCAL1.L coding downstream 97400 7119711 ~ 7124770 (+)
CI01000054_07145831_07153505 NA coding downstream 123194 7145505 ~ 7154654 (+)
CI01000054_07189617_07192052 ZBTB8B coding downstream 165666 7187977 ~ 7192069 (+)
CI01000054_07193147_07196114 FUCA1.1, FUCA1.2 coding downstream 170836 7193147 ~ 7196219 (+)
G232848 NA non-coding upstream 10201 7007111 ~ 7009223 (+)
G232886 NA non-coding upstream 15450 7003611 ~ 7003974 (+)
G232883 NA non-coding upstream 73591 6945630 ~ 6945833 (+)
G232882 NA non-coding upstream 73828 6944556 ~ 6945596 (+)
G232876 NA non-coding upstream 102144 6915946 ~ 6917280 (+)
G232914 NA non-coding downstream 45103 7067414 ~ 7067653 (+)
G232942 NA non-coding downstream 154028 7176339 ~ 7176575 (+)
G232944 NA non-coding downstream 155937 7178248 ~ 7178633 (+)
G232948 NA non-coding downstream 159591 7181902 ~ 7182155 (+)
G232907 NA non-coding downstream 195828 7218139 ~ 7219649 (+)
G232870 NA other upstream 130921 6887912 ~ 6888503 (+)
G232659 NA other upstream 643530 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 712564 6305908 ~ 6312163 (+)
G232558 NA other upstream 977561 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1394749 5608457 ~ 5634804 (+)
G233024 NA other downstream 545212 7567523 ~ 7609893 (+)
G233306 NA other downstream 1282288 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1283626 8325126 ~ 8329716 (+)
G235560 NA other downstream 3365825 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4542665 11564820 ~ 11568999 (+)

Expression


Co-expression Network