CI01000054_07271120_07280248


Basic Information

Item Value
gene id CI01000054_07271120_07280248
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7270906 ~ 7280365 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07271120_07280248.mRNA
CTACAAAATCACGCCGCTCACATGCTTGGCTCCAGCTATTTCATTTAAAGTGGGGGGACCCTCCCACCCTGTACAGGCATCTGTACAAAAACCTTCATGCCAGGTTTGGAAATGTTATAATATGAGTTTCTACACTTTCTGCAATGGCAAATGCAGTTTGTATGCAAATGTTTTGAAGTGGGTGGGTAAGTGTGTGGTTTCTTGAGATCACAATATGGCAAACAGCACAAAACCTGATTTAACACCTCCGGTTCATGAAGTGAGCGTAAACATGAGGAGAAAAAAAGTAGGTAAACTCAGGAAGCTCCTCCAGTGTCTACTGCAAATCATCCTGATCTATTTATCTGTGTCTCACTCTGGAGGAATATCGAGATCAGGATGTGGTCTTGAGGTGATCTACCATGCGGTGTGATCGATGGATCGATTAATAGATGAGTCAGTGGGTATGTAACCTCTGTGTGTTTCACATGAAAAGTACAGTGTGGGTTGGGTATCAAGAATCATACTGGCTTAGAATTGGTTCTGGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07271120_07280248.mRNA True 529 mRNA 0.43 2 7270906 7280365

Neighbor

gene id symbol gene type direction distance location
CI01000054_07252016_07252204 NA coding upstream 18489 7251801 ~ 7252417 (+)
CI01000054_07240475_07241355 NA coding upstream 28448 7240423 ~ 7242458 (+)
CI01000054_07209423_07216395 GMPR coding upstream 53696 7209423 ~ 7217210 (+)
CI01000054_07198599_07202146 FUCA1.1, FUCA1.2 coding upstream 68613 7198599 ~ 7202293 (+)
CI01000054_07193147_07196114 FUCA1.1, FUCA1.2 coding upstream 74687 7193147 ~ 7196219 (+)
CI01000054_07438245_07449632 PAG1 coding downstream 157067 7437432 ~ 7449712 (+)
CI01000054_07454627_07503082 ZNF704 coding downstream 174262 7454627 ~ 7503082 (+)
CI01000054_07539134_07556858 ZBTB10 coding downstream 258769 7539134 ~ 7558395 (+)
CI01000054_07582152_07584554 NA coding downstream 301615 7581980 ~ 7584692 (+)
CI01000054_07599184_07601743 HEY1 coding downstream 317541 7597906 ~ 7603125 (+)
G232907 NA non-coding upstream 51257 7218139 ~ 7219649 (+)
G232948 NA non-coding upstream 88751 7181902 ~ 7182155 (+)
G232944 NA non-coding upstream 92273 7178248 ~ 7178633 (+)
G232942 NA non-coding upstream 94331 7176339 ~ 7176575 (+)
G232914 NA non-coding upstream 203253 7067414 ~ 7067653 (+)
G232904 NA non-coding downstream 19315 7299680 ~ 7330015 (+)
G233034 NA non-coding downstream 66438 7346803 ~ 7347003 (+)
G233010 NA non-coding downstream 81838 7362203 ~ 7387184 (+)
G233050 NA non-coding downstream 108779 7389144 ~ 7389348 (+)
G233051 NA non-coding downstream 108997 7389362 ~ 7389577 (+)
G232870 NA other upstream 382403 6887912 ~ 6888503 (+)
G232659 NA other upstream 895012 6374850 ~ 6375894 (+)
CI01000054_06305908_06312122 NA other upstream 964046 6305908 ~ 6312163 (+)
G232558 NA other upstream 1229043 5993660 ~ 6041863 (+)
CI01000054_05608892_05634793 RNF19B other upstream 1646231 5608457 ~ 5634804 (+)
G233024 NA other downstream 287158 7567523 ~ 7609893 (+)
G233306 NA other downstream 1024234 8304599 ~ 8304949 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other downstream 1025572 8325126 ~ 8329716 (+)
G235560 NA other downstream 3107771 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 4284611 11564820 ~ 11568999 (+)

Expression


Co-expression Network