CI01000054_07311700_07314853


Basic Information

Item Value
gene id CI01000054_07311700_07314853
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7311540 ~ 7317174 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07311700_07314853.mRNA
AATCACTCATTCTTCGGTGGTGGGTGGGACATGTTCAAAGCCTGCAAGGAATCAGCACCAGGGTTATTAAAGTTAGCTGAAACTAAAAACATAAAACAACTTTTATTGCTTGAAATAAAATAACCTTAAGCGGAAATATTTAAAAAAAATAAATAAAATAAACTTATTTTATTTCAGCTATTATTCTCATTTTAAAATATCTACAGCTAAAACTGAAATGAAAATTATGATATAGACCTATTTAATAAACAAAAACTAATAAAAATGACAAAAACAAATTTCATTGAAATGAAAAGAGAAAATATTCAAATTCAGAATATTAATAAAATCTCTACCACAGATTACCACAGATTTTATCACAGATTTCAGCTGAACTGGATTGCCATCATCAAGTACCTTGTTTATTAAATGTTTTGTAATCTTATTATGTTTTCAGCTAATGTAGTACTATTAGCTTTGTTTAAAATATCACATAAACTTTCACATGTTAAAAAGTTCAATAAGACAATCGCAAAAGTAATCCATATGCATTTAGCGGTTTAGTCTTCTAAAGAGACACAGTTGTTTTAAATGATGAACATATAAAAATGTAGGCTTTTATTCACATATAAGCATATATAAACAAAATACCTTAATGTATTTTTTTTTTTTGAAGAAATGTTTTTGAAACGACATGAGGATAACTAAATGAAGACAGAATTTTCATTTTTGGGTGAATTATACTTGCCACGATGTGCAGTGTAAAGTCTAAAGTCTGGGGGATCCTGCATGATTGCATGATTTTGCCAAGTAGGACATGTTCCTGGACCAGCATCTTTGTTGGTCCTGGAACAACATTTCAGATTCCTCAAGCAACCAATCAGATTATAAGGTTAGACTGGGCTTGGGTCTTCCACCACATTCTTATCAAGTCTGACTGTACGGGTAGATAAAGTGTTGGCTTAGGTTTAGGGTTAGGTTTGGGGTTAGAGAGTGTTTATGTTTATTTAACAGGACAGTTGTTCTAGGACCAACAAATGATGTTGATCCAAGAGCACAATCTACTTGGCAAAGCCCTGGATCCAATTAGTTAGGGTAATGTAACATTACATGACAGTACTAGTAATGCACTAAAATGATTTTTTTTTACCAAAATTAAAGTTTAAATTTAGCTGAAAACCAAAAATAAAGTTTTTTTTAATACATGTAATATAGCGCACATATTTAGAAAAATGCTCCACTCCTTTTTTCTAGCTAACTATCATGTTTATGGTCATTGAATTTGAATGGCTTTCCTGAAGTAAATGTATTGTGTGACATTGTTTACAAGCTGTTTTATTGACGTCTTTCTGCAGTTGAAACACTGATTGAGCAATTACATGAGACGTGATACTTTTCAGTTACACTGTTTCTTTCAACATACCCAGCCCTTGCGTCCACACAGCTGACATGTTAAAGGGTTAGTTCACCCAAAAATGAAAATGTCATTTATTACTCACCCTCATGTTGTTCTACACCCATAAGGCCTTCTTTCATCTTCAGAACACAAATTAAGATATTTTTGATGAAATCCGATGGCTCAGTAAGGCCTCTATAGACAGCAATGCCATTGAACTTCTCAAGATCAAGAAAGGCACTCAAAACATATTTAAAACAGTTCATGTGAGTTCAGTGGTTCAATCTTAATATTATAAAACAACGAGAATACTTTTTGTGTGCCAAAAAAACAAAATAATGACTTTTCAACGATATCTAGTGATGGCCGATTTCAAAACACTGCTTCGAATCTTTTGTTTCAAATCAGTGATTTGGAGCGCCAAAGTCACGTGATTTCAGCAGTTTGGCATTTTGACATGCAATCCGAATCACTGAATAGGAGAAAGTGCAATGCACAATATGGCTGAATAAGTCCCGCCTTCTAAATAAAAGAACCAATCGCTGATTGGTAAAGTCATCGTGTCACTGCAGCTGCCATTAGAAGCTCCGGTTTCTATAGAAACAGTCAGTGTTCTGAGACGCGCTTAGGACTGCGCATACGCATTAGCTTGGTCCAGCCTGAAAAATTCAGTTTTTTTTTTTTTGTCATGTTTGAGCATTTATAAACAAAATTTATGAGACCATTGATTTCATTTCAAATATGAAATATAACTGCAAGCTTGGCGAACACTTGCATGACTAAAATAGATACCTGAGAGGTGTTTTAAAGATGGCCGCCGAGTTAAATGACTTGTCTTAAAGAGACTTTGATCCCTTGCTAGTACCAGGCTTTTAGTTCAGCCTTTAGCATGAGCAATAGATAAACTCATGGAGATAGTCTGGTATAACTGAGTGTAGCACCAGCCATGCCACGATACTTGTTACTAAACCAAGCCAGTCTGACACCTTCCCACGTTCATCGCGATTGTGATTCAAGTAAAGGTCAGTTTTCCTCGGCTGTTTGCTGTGGTCGGGGTCATTGTTGGGATAACAGCCATCTCACCGAGTGTGCTTGTGTTTTTCTGGAGATTACATCAGGAAAGGCATACCAGAAAGGGGCTGGGGGCTTCTTCTTTTTCCTGTTGGGAAATGATTTGATTCATGTCGCCTGTGTTCTCAGTCTCAGCAACATATTCATACTAGTTACCTCAACGTTCGAGCACAAGCCGAGCTCTGGCGTTTTCTCTCAGCCGGTGACAGAGAGACAGCGGGCGTGTTGTGTGGGCTGGAGACTGAACGTTATGAGCTGCAAGCGATATGGTCTGTGGAAACTAGTGGGGTCATTGGTGAAACTTCAGCTGGGGGATCCCCTGATCCCTAGTACCTCTCAGGAGTCTTATATCTGTTTACCATGAGGTTAAAGTTCAGTTGCGTTATTTACAGGGTCTAAAATTAACTTTTTGCCACACCAGCCCATGGTGATTGTATTGACAAAATATATTATTGGTCATATATATGTTTTTAAGGGCCATGAAGCATTATTTACGGAAAAATATGAATTTTTCTCCCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07311700_07314853.mRNA True 2970 mRNA 0.36 3 7311540 7317174

Neighbor

gene id symbol gene type direction distance location
CI01000054_07228008_07231489 ATXN1A, ATXN1 coding downstream 80051 7227594 ~ 7231489 (-)
CI01000054_07165957_07169539 HEYL coding downstream 142001 7165435 ~ 7169539 (-)
CI01000054_07130499_07136946 NA coding downstream 174594 7130315 ~ 7136946 (-)
CI01000054_07080724_07095503 NA coding downstream 215867 7080352 ~ 7095673 (-)
CI01000054_07033076_07038297 STK3 coding downstream 273243 7031700 ~ 7038297 (-)
CI01000054_07368294_07372480 FAM8A1A coding upstream 50918 7368092 ~ 7373799 (-)
CI01000054_07385840_07388475 PMP2, FABP11A, FABPH coding upstream 68618 7385792 ~ 7389417 (-)
CI01000054_07390631_07391977 MRPL53 coding upstream 73412 7390586 ~ 7393103 (-)
CI01000054_07398765_07399272 NA coding upstream 81380 7398554 ~ 7400054 (-)
CI01000054_07418471_07418846 NA coding upstream 100993 7418167 ~ 7418853 (-)
G233904 NA non-coding downstream 84695 7220031 ~ 7226845 (-)
G233915 NA non-coding downstream 105360 7205908 ~ 7206180 (-)
G233907 NA non-coding downstream 112583 7192999 ~ 7198957 (-)
G233899 NA non-coding downstream 129420 7181769 ~ 7182120 (-)
G233896 NA non-coding downstream 133101 7177840 ~ 7178439 (-)
G233922 NA non-coding upstream 20730 7337904 ~ 7338116 (-)
G233942 NA non-coding upstream 191194 7508368 ~ 7509658 (-)
G234023 NA non-coding upstream 249065 7566239 ~ 7566525 (-)
G234024 NA non-coding upstream 249782 7566956 ~ 7567186 (-)
G234025 NA non-coding upstream 250060 7567234 ~ 7567509 (-)
CI01000054_06629482_06641861 TRIQK other downstream 657527 6628082 ~ 6642160 (-)
G232274 NA other downstream 2102300 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 2639307 4670151 ~ 4681361 (-)
G231645 NA other downstream 3328717 3981847 ~ 3982823 (-)
G235216 NA other upstream 1930865 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 2165973 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2546147 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3486697 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3553930 10871104 ~ 10881495 (-)

Expression


Co-expression Network