CI01000054_07418471_07418846


Basic Information

Item Value
gene id CI01000054_07418471_07418846
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7418167 ~ 7418853 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_07418471_07418846.mRNA
ACAGGAAATGTGTAAGTTCAGCGGCATAGAAAGAATCCAGCCTAAAAATACAGGAATAACAAAGGAATATGGATCGATCTTCTCAATGGCATTAGAGGAATGTGGCCCTCTGGAGACCTCGGATGATGAACTGGAGGTTTATGATCTCAGATGCATGTATGATTGTGAGACGAATGATAGCATTGTACTTATACTTGACATTCTGCTTGGGACAATGAATTTTCTAGGTCAATAAGAGATTAGGATAGTGTCTCAGAGCTGGGATGAATGAGGTCTCAAACGGGTCAAACTCTTAGAGTCACTGTCACCAAAGGAAAGATACAACCGATCTGGTACATTGAGAACATGGCTGCAGTTAAAAAAAAAAGAACTACTTCCCCTTTTCTTATGTGGTTTTGAACTGTTTGTGGTTCATTTTAAAAAACTTTATCAACTTTTTCTCAAATTGTAACTTGCAATCAGGAGAAAGAACAAGTATGCTTTGAACGAAAAAAAAAAAAAACCTTTCTATTGCACAAAAATCTTGGTCAAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_07418471_07418846.mRNA True 539 mRNA 0.37 2 7418167 7418853

Neighbor

gene id symbol gene type direction distance location
CI01000054_07398765_07399272 NA coding downstream 18113 7398554 ~ 7400054 (-)
CI01000054_07390631_07391977 MRPL53 coding downstream 25064 7390586 ~ 7393103 (-)
CI01000054_07385840_07388475 PMP2, FABP11A, FABPH coding downstream 28750 7385792 ~ 7389417 (-)
CI01000054_07368294_07372480 FAM8A1A coding downstream 44368 7368092 ~ 7373799 (-)
CI01000054_07311700_07314853 NA coding downstream 100993 7311540 ~ 7317174 (-)
CI01000054_07516390_07526784 TPD52 coding upstream 97314 7516167 ~ 7527449 (-)
CI01000054_07607425_07611037 STMN2A, STMN2B, STMN2 coding upstream 187647 7606500 ~ 7611037 (-)
CI01000054_07642350_07658894 NA coding upstream 222947 7641800 ~ 7660515 (-)
CI01000054_07712126_07718933 GMNN coding upstream 293182 7712035 ~ 7718933 (-)
CI01000054_07723457_07725732 ACOT13 coding upstream 304555 7723408 ~ 7725732 (-)
G233922 NA non-coding downstream 80051 7337904 ~ 7338116 (-)
G233904 NA non-coding downstream 191322 7220031 ~ 7226845 (-)
G233915 NA non-coding downstream 211987 7205908 ~ 7206180 (-)
G233907 NA non-coding downstream 219210 7192999 ~ 7198957 (-)
G233899 NA non-coding downstream 236047 7181769 ~ 7182120 (-)
G233942 NA non-coding upstream 89515 7508368 ~ 7509658 (-)
G234023 NA non-coding upstream 147386 7566239 ~ 7566525 (-)
G234024 NA non-coding upstream 148103 7566956 ~ 7567186 (-)
G234025 NA non-coding upstream 148381 7567234 ~ 7567509 (-)
G234042 NA non-coding upstream 210724 7629577 ~ 7630828 (-)
CI01000054_07165957_07169539 HEYL other downstream 246494 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 764154 6628082 ~ 6642160 (-)
G232274 NA other downstream 2208927 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 2745934 4670151 ~ 4681361 (-)
G231645 NA other downstream 3435344 3981847 ~ 3982823 (-)
G235216 NA other upstream 1829186 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 2064294 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2444468 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3385018 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3452251 10871104 ~ 10881495 (-)

Expression


Co-expression Network