CI01000054_08704697_08709175 (EIF3I)


Basic Information

Item Value
gene id CI01000054_08704697_08709175
gene name EIF3I
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 8704697 ~ 8709349 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_08704697_08709175.mRNA
AAACCCATTCTTCTGCAGGGCCATGAGAGGTCCATCACTCAGATCAAATACAACAGAGAGGGAGATCTCTTGTTCTCAGTAGCCAAGGATCCAATTGCTAATGTTTGGTACTCTGTCAATGGAGAAAGGCTCGGCACTTATAATGGACACACCGGTGCCGTCTGTTCTTTAGTACTTGTCGCTTGTTTTTGGCAAAAATGTTTCTTAACATGTATCAAAGGGGACACAAAGAACGTCTTGACTGGATCTGCTGATAACAGCTGCAGGCTCTGGGACTGTGAGACAGGAGAGCAGCTGTTTAAGCTGGACACCAGCTCGGCGGTGAGGACGTGTGGCTTTGACTTCAGTGGGAACATCATAATGTTTTCCACAGACAAGCAGATGGGCTACCAGTGCTATCTCAACTATCTCGACCTGCGAGACCCCCAACAAATTGAGGGGAACCAGCCATATCTGTCTGTTCCCTGCAGTGAATCAAAGATCACCAGTGCTGTATGGGGTCCGCTGGGAGAGTTTGTGATCGCTGGCCATGAAAATGGAGAAATTAACCAGTTCAGTGCTAAGTCAGGAGAGATTCTGAAGAAGGCAAAAGAGCACACCAAACAGATCAATGACATCCAGTCATCTGTGGATCTCACGATGGTCATCACTGCCTCCAAAGACTGTACTGCCAAGTTGTTTGACTCCACAACACTTGATCACATCAAAACCTTCAAAACAGAGCGACCTGTTAACTCCTCAGCCATCTCGCCCATCATGGATCATGTGGTGATGGGAGGTGGTCAGGAGGCTATGGAAGTCACAACCACCTCCACTAGGATCGGCAAATTCGAGGCCAGGTTTTTCCATGCGGCTTATGAAGAGGAGTTTGGCCGTGTGAAGGGACACTTCGGCCCCATTAATTGTGTGGCATTCCACCCAGATGGGAAAAGTTATAGCAGTGGAGGAGAGGATGGTTACGTCAGAATTCATTACTTCGATCCCCACTATTTTGATTTTGAGCTTGAGGCGTAATAACCAGTGACCACCAACATTCCCAACATCCAAGACAGATCACCATTTGGACACACTAGTAACACCTGATCGACTACGCAAGGCCGTATAAAACTCCATGCTTGGCCACCTTCATACAAATATTGCATTTAAAGCATTTGATGCAATGTGTATTTAAAGAATTTAGCATTCTGA

Function

symbol description
eif3i Predicted to enable translation initiation factor activity. Acts upstream of or within liver development and sprouting angiogenesis. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex, eIF3m. Is expressed in several structures, including digestive system; endothelial cell; nervous system; otic vesicle; and pectoral fin. Orthologous to human EIF3I (eukaryotic translation initiation factor 3 subunit I).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K03246 EIF3I; translation initiation factor 3 subunit I

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_08704697_08709175.mRNA True 1188 mRNA 0.47 10 8704697 8709349

Neighbor

gene id symbol gene type direction distance location
CI01000054_08695322_08702750 TXLNA coding upstream 1388 8695322 ~ 8703309 (+)
CI01000054_08675009_08686170 KPNA6 coding upstream 18018 8675009 ~ 8686679 (+)
CI01000054_08485645_08496381 NA coding upstream 207832 8485428 ~ 8496865 (+)
CI01000054_08419492_08424760 KHDRBS1 coding upstream 279776 8418619 ~ 8424921 (+)
CI01000054_08378811_08396034 PPP1R10 coding upstream 308475 8378715 ~ 8396222 (+)
CI01000054_08725294_08727378 NA coding downstream 15815 8725164 ~ 8727830 (+)
CI01000054_08771624_08790335 NA coding downstream 62212 8771561 ~ 8790922 (+)
CI01000054_08908112_08917294 FNDC5B, FNDC5, FNDC5A coding downstream 198763 8908112 ~ 8917595 (+)
CI01000054_08969979_08973590 NA coding downstream 260630 8969979 ~ 8973666 (+)
CI01000054_08975450_08984634 E2F3 coding downstream 266010 8975359 ~ 8985175 (+)
G234495 NA non-coding upstream 67533 8636936 ~ 8637164 (+)
G234490 NA non-coding upstream 84469 8619942 ~ 8620228 (+)
G234482 NA non-coding upstream 106520 8597970 ~ 8598177 (+)
G234452 NA non-coding upstream 131604 8572885 ~ 8573093 (+)
G234433 NA non-coding upstream 142890 8561597 ~ 8561807 (+)
G234536 NA non-coding downstream 63472 8772821 ~ 8773027 (+)
G234541 NA non-coding downstream 68812 8778161 ~ 8778376 (+)
G234543 NA non-coding downstream 69972 8779321 ~ 8779587 (+)
G234577 NA non-coding downstream 112385 8821734 ~ 8822062 (+)
G234602 NA non-coding downstream 171000 8880349 ~ 8880654 (+)
CI01000054_08325126_08329621 HPCAL4, VSNL1, VSNL1.S other upstream 375109 8325126 ~ 8329716 (+)
G233306 NA other upstream 399748 8304599 ~ 8304949 (+)
G233024 NA other upstream 1094804 7567523 ~ 7609893 (+)
G232870 NA other upstream 1816194 6887912 ~ 6888503 (+)
G232659 NA other upstream 2328803 6374850 ~ 6375894 (+)
G235560 NA other downstream 1678787 10388136 ~ 10392378 (+)
CI01000054_11564820_11568338 S100V2 other downstream 2855627 11564820 ~ 11568999 (+)
CI01000054_11633235_11635069 PRF1.8 other downstream 2923627 11632959 ~ 11635103 (+)
CI01000054_11648262_11648786 NA other downstream 2938630 11647959 ~ 11649495 (+)
G236874 NA other downstream 3104339 11813688 ~ 11816475 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location