CI01000054_09488559_09488870


Basic Information

Item Value
gene id CI01000054_09488559_09488870
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 9488276 ~ 9488870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_09488559_09488870.mRNA
GTTCATCACACAGCCTTTAATGTTGACACATCATGTTGCCCTTGTGTCGATTCAAATGAGTCAAGCCACTTGTTATCGCTTCAACATAGCGGCGAAACCGTTAAGCGAGTTCATCAGCGCTGTGAGGGAGACGGTCCAGTTGCTCTCACGCGCTGCGACTGCTGGATGCGCGGTCCTGGTGGGGCTTTGTCGATCGGTGTTCAAAATTCAGGTGTTCCCGGTGGCCAGTCAATCTATTCCACACAGCCAATCACGGGCCCCAGCCCCGCCTACTCCGGCCTAGAAGTGCTTCAGAAACATCGCCGAGAGTAAAATTAATACCATACCCTATACCTAGCTACAGAGTCTGTCGGAACAGGAAAATGTCAATTTCTGAATGCGAACTGGAAGCTGACCGGTGTTATTTCAGAGCTAGAGGACAGTAGGACACTATCTGATTAAATGCGAGACCTCTCAGATCATTTAAGGCACCTATGTAGCCTATTACTTTCACTATAGGTATTGCATATATGCTGTCAAACCAAAAAGAACCTTTTACAGAATTACTCAGTTAAGACACTTAAACGAAAAACATGATAATATAGATATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_09488559_09488870.mRNA True 595 mRNA 0.45 1 9488276 9488870

Neighbor

gene id symbol gene type direction distance location
CI01000054_09483912_09484282 MRPL36 coding downstream 3994 9483147 ~ 9484282 (-)
CI01000054_09453616_09482480 LPCAT1 coding downstream 5553 9452109 ~ 9482723 (-)
CI01000054_09218869_09223868 NA coding downstream 264157 9218632 ~ 9224119 (-)
CI01000054_09077309_09080163 NA coding downstream 407464 9076831 ~ 9080812 (-)
CI01000054_08953766_08966617 TMEM57, TMEM57A coding downstream 521659 8952134 ~ 8966617 (-)
CI01000054_09495785_09497239 IRX4B, IRX4 coding upstream 6580 9495450 ~ 9497682 (-)
CI01000054_09531778_09544007 NA coding upstream 42640 9531510 ~ 9544510 (-)
CI01000054_09650064_09651286 MED10, MED10.S coding upstream 160937 9649807 ~ 9651286 (-)
CI01000054_09686420_09705911 NSUN2.S, NSUN2 coding upstream 197177 9686047 ~ 9705911 (-)
CI01000054_09812111_09813425 NA coding upstream 322988 9811858 ~ 9813501 (-)
G235308 NA non-coding downstream 46425 9437469 ~ 9441851 (-)
G235298 NA non-coding downstream 87710 9400361 ~ 9400566 (-)
G235250 NA non-coding downstream 171478 9316532 ~ 9316798 (-)
G235244 NA non-coding downstream 185572 9302438 ~ 9302704 (-)
G235239 NA non-coding downstream 194884 9292830 ~ 9293392 (-)
G235350 NA non-coding upstream 37978 9526848 ~ 9527267 (-)
G235368 NA non-coding upstream 67894 9556764 ~ 9559903 (-)
G235575 NA non-coding upstream 87724 9576594 ~ 9576876 (-)
G235582 NA non-coding upstream 93552 9582422 ~ 9664231 (-)
G235591 NA non-coding upstream 99189 9588059 ~ 9657253 (-)
G235216 NA other downstream 239738 9248039 ~ 9248538 (-)
CI01000054_07165957_07169539 HEYL other downstream 2316603 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 2834263 6628082 ~ 6642160 (-)
G232274 NA other downstream 4279036 5206199 ~ 5209240 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 374451 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 1315001 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 1382234 10871104 ~ 10881495 (-)
G236748 NA other upstream 1796324 11285194 ~ 11295784 (-)
CI01000054_11780397_11781842 SNAPIN other upstream 2290020 11778890 ~ 11781880 (-)

Expression


Co-expression Network